RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PRICKLE1Q96MT3 831 aaPredicted RBP19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 FUCA2Q9BTY2 467 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 ARRDC1-AS1Q9H2J1 176 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 STAP1Q9ULZ2 295 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 PLA2G4CQ9UP65 541 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 GVINP1Q7Z2Y8 2422 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 DCHS1Q96JQ0 3298 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 GPR179Q6PRD1 2367 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 F5H5T6 163 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 SYNCRIPO60506 623 aaKnown RBP19■□□□□ 0.63
SYNGR3-204ENST00000564642 EPN2O95208 641 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 P2RY2P41231 377 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 IL12RB1P42701 662 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 FMO1Q01740 532 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 TRIM72Q6ZMU5 477 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 SND1Q7KZF4 910 aaKnown RBP eCLIP19■□□□□ 0.63
SYNGR3-204ENST00000564642 DDX51Q8N8A6 666 aaKnown RBP eCLIP19■□□□□ 0.63
SYNGR3-204ENST00000564642 FIBINQ8TAL6 211 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 PARD6AQ9NPB6 346 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 RTN4Q9NQC3 1192 aaKnown RBP19■□□□□ 0.63
SYNGR3-204ENST00000564642 SEMA4GQ9NTN9 838 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 OTOGLQ3ZCN5 2332 aa19■□□□□ 0.63
SYNGR3-204ENST00000564642 H0Y626 953 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 GOLGA8SH3BPF8 625 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 TEX33O43247 280 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 CYP1A1P04798 512 aaPredicted RBP18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 ATP5BP06576 529 aaKnown RBP18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 CCDC172P0C7W6 258 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 CHRNB2P17787 502 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 POLR2EP19388 210 aaKnown RBP18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 TGM1P22735 817 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 CD70P32970 193 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 SULT1E1P49888 294 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 TPM4P67936 248 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 CDH18Q13634 790 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 ENPP2Q13822 863 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 CSRP2Q16527 193 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 FNDC3BQ53EP0 1204 aaKnown RBP18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 C2CD6Q53TS8 623 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 MBLAC2Q68D91 279 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 SERPINA13PQ6UXR4 307 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 KIAA0907Q7Z7F0 614 aaPredicted RBP18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 ADIPOR2Q86V24 386 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 WFDC5Q8TCV5 224 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 MYEOVQ96EZ4 313 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 NPY6RQ99463 290 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 WDCPQ9H6R7 721 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 TMEM51Q9NW97 253 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 CALCOCO1Q9P1Z2 691 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 PCDHGA5Q9Y5G8 931 aa18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 EP300Q09472 2414 aaPredicted RBP18.99■□□□□ 0.63
SYNGR3-204ENST00000564642 ZNF217O75362 1048 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 LUC7L3O95232 432 aaKnown RBP18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 F9P00740 461 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 SERPINC1P01008 464 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 EPHX1P07099 455 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 NDUFV2P19404 249 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 BCKDHBP21953 392 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 ID4P47928 161 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 LMNB2Q03252 620 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 DEUP1Q05D60 604 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 IQCB1Q15051 598 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 PMS2CLQ68D20 193 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 RNF43Q68DV7 783 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 CYB5D2Q8WUJ1 264 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 SEPT11Q9NVA2 429 aaKnown RBP18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 ABCA7Q8IZY2 2146 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 PLXND1Q9Y4D7 1925 aa18.98■□□□□ 0.63
SYNGR3-204ENST00000564642 EPG5Q9HCE0 2579 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 PRR5-ARHGAP8B1AHC4 643 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 FOXD2O60548 495 aaPredicted RBP18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 MOCS3O95396 460 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 MMP8P22894 467 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 ARHGAP8P85298 464 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 CREB5Q02930 508 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 LMAN2Q12907 356 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 SKOR2Q2VWA4 1001 aaPredicted RBP18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 MAP7D1Q3KQU3 841 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 SLC25A52Q3SY17 297 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 FUT11Q495W5 492 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 RABGAP1LQ5R372 815 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 KIAA1324Q6UXG2 1013 aaKnown RBP18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 MMS22LQ6ZRQ5 1243 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 LPCAT2Q7L5N7 544 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 FRMD1Q8N878 549 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 SLC30A5Q8TAD4 765 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 MRGPRX1Q96LB2 322 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 PRMT1Q99873 361 aaKnown RBP18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 CD248Q9HCU0 757 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 KIAA1522Q9P206 1035 aaPredicted RBP18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 PAXBP1Q9Y5B6 917 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 ZFHX4Q86UP3 3567 aa18.97■□□□□ 0.63
SYNGR3-204ENST00000564642 CEP192Q8TEP8 1941 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 DLDP09622 509 aaKnown RBP18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 UNGP13051 313 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 FERP16591 822 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 PRKCHP24723 683 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 MPLP40238 635 aa18.96■□□□□ 0.63
SYNGR3-204ENST00000564642 NSFP46459 744 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms