RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 LGALS2P05162 132 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ENO1P06733 434 aaKnown RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 TCF4P15884 667 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ALOX15P16050 662 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 HOXB8P17481 243 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ARF4P18085 180 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 L1CAMP32004 1257 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 GJA5P36382 358 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 GNL1P36915 607 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 GCLCP48506 637 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 TAF6P49848 677 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 CDH8P55286 799 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 NAA20P61599 178 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 OVGP1Q12889 678 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 MTA1Q13330 715 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 MED21Q13503 144 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 THOC5Q13769 683 aaKnown RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 VGLL4Q14135 290 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 MAP7Q14244 749 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 RCN2Q14257 317 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 DGKDQ16760 1214 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 SLC10A6Q3KNW5 377 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 HSDL1Q3SXM5 330 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 SEZ6Q53EL9 994 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 FASTKD1Q53R41 847 aaKnown RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 FBXO47Q5MNV8 452 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ACBD5Q5T8D3 534 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 FAXCQ5TGI0 409 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 TMEM154Q6P9G4 183 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 SLC30A9Q6PML9 568 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 KCNT2Q6UVM3 1135 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 CATSPER4Q7RTX7 472 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 CAND1Q86VP6 1230 aaKnown RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 RASSF3Q86WH2 238 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 CCDC117Q8IWD4 279 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 SIX6OS1Q8N1H7 587 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 TMEM86AQ8N2M4 240 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ZNF276Q8N554 614 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 LZTR1Q8N653 840 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ARFGAP1Q8N6T3 406 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 COLGALT1Q8NBJ5 622 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 PCDH19Q8TAB3 1148 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 UBA3Q8TBC4 463 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ZFAND2BQ8WV99 257 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 KCTD13Q8WZ19 329 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 GFM2Q969S9 779 aaKnown RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 NTAN1Q96AB6 310 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 C18orf25Q96B23 403 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ACSF2Q96CM8 615 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 CSPG4P5Q96PW8 444 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 BTBD9Q96Q07 612 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 FDXACB1Q9BRP7 624 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 IL22Q9GZX6 179 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ILKAPQ9H0C8 392 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 MRM3Q9HC36 420 aaKnown RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 ARL8BQ9NVJ2 186 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 C6orf203Q9P0P8 240 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 IPO11Q9UI26 975 aaKnown RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 AAR2Q9Y312 384 aaKnown RBP7.84□□□□□ -1.15
ATXN3-249ENST00000564606 SNX9Q9Y5X1 595 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 SLC4A7Q9Y6M7 1214 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 PARP14Q460N5 1801 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 LOC285556D6RIA3 1793 aa7.84□□□□□ -1.15
ATXN3-249ENST00000564606 NRCAMQ92823 1304 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 SMIM35A0A1B0GVV1 85 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CAPN14A8MX76 684 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 ZBTB42B2RXF5 422 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 H0Y3Z8 333 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 NFKBIEO00221 500 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CCNT2O60583 730 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 PLIN3O60664 434 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 TRIM13O60858 407 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 DGKIO75912 1065 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 ANXA9O76027 345 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 USP1O94782 785 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 HSPA4LO95757 839 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CD48P09326 243 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 RALBP11234 206 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CPA3P15088 417 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CRABP2P29373 138 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 RAP1GAPP47736 663 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 LHX1P48742 406 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 HARS2P49590 506 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 SULT1E1P49888 294 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 CLCN3P51790 818 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 ABCE1P61221 599 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 ROR2Q01974 943 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 SNAPC2Q13487 334 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 EFTUD2Q15029 972 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 HERC3Q15034 1050 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 PAFAH1B3Q15102 231 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 PUS10Q3MIT2 529 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 PKDCCQ504Y2 493 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 RARS2Q5T160 578 aaKnown RBP7.83□□□□□ -1.16
ATXN3-249ENST00000564606 MROH9Q5TGP6 573 aa7.83□□□□□ -1.16
ATXN3-249ENST00000564606 EEF1DP3Q658K8 133 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms