RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 TXNRD3NBQ6F5E7 133 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 ARID3BQ8IVW6 561 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-208ENST00000564247 MFSD6LQ8IWD5 586 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 PRSS33Q8NF86 280 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 DNASE1L2Q92874 299 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 AZIN2Q96A70 460 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 FAM122AQ96E09 287 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 SHDQ96IW2 340 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 BTN2A3PQ96KV6 586 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 SLC22A12Q96S37 553 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 PEBP4Q96S96 227 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 SNRNP25Q9BV90 132 aaKnown RBP17.54■□□□□ 0.4
CMTM3-208ENST00000564247 TRMT61BQ9BVS5 477 aaKnown RBP17.54■□□□□ 0.4
CMTM3-208ENST00000564247 DHX35Q9H5Z1 703 aaKnown RBP17.54■□□□□ 0.4
CMTM3-208ENST00000564247 TBC1D17Q9HA65 648 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.54■□□□□ 0.4
CMTM3-208ENST00000564247 SMPD4Q9NXE4 827 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 LSM7Q9UK45 103 aaKnown RBP17.54■□□□□ 0.4
CMTM3-208ENST00000564247 SNX12Q9UMY4 172 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 ARHGAP26Q9UNA1 814 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 SH3BP1Q9Y3L3 701 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 LRRD1A4D1F6 860 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 PI15O43692 258 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 PAGE1O75459 146 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 MOCS2O96007 188 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-208ENST00000564247 IGLV3-27P01718 113 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 IRF1P10914 325 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 KDELR1P24390 212 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 MARCKSL1P49006 195 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 SLC11A2P49281 568 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 ZNF135P52742 658 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-208ENST00000564247 CDH6P55285 790 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 SCAPQ12770 1279 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 GRM2Q14416 872 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 MLF2Q15773 248 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-208ENST00000564247 SEL1L2Q5TEA6 688 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 CCDC50Q8IVM0 306 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 OSBPL9Q96SU4 736 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 PSMB7Q99436 277 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 DDX50Q9BQ39 737 aaKnown RBP17.53■□□□□ 0.4
CMTM3-208ENST00000564247 OSBPL2Q9H1P3 480 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 CARD9Q9H257 536 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 BRD9Q9H8M2 597 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 TDP1Q9NUW8 608 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 ZNF510Q9Y2H8 683 aa17.53■□□□□ 0.4
CMTM3-208ENST00000564247 HEPACAM2A8MVW5 462 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 STK25O00506 426 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 GALR2O43603 387 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-208ENST00000564247 STC2O76061 302 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 URI1O94763 535 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-208ENST00000564247 L1CAMP32004 1257 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 ARL4AP40617 200 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 PTPN5P54829 565 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 COPS2P61201 443 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 TUBB2AQ13885 445 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 TTC16Q8NEE8 873 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 ALG3Q92685 438 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 IRF7Q92985 503 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 RNF25Q96BH1 459 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-208ENST00000564247 RSPRY1Q96DX4 576 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 C1orf74Q96LT6 269 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 TUBB2BQ9BVA1 445 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 MAK16Q9BXY0 300 aaKnown RBP17.52■□□□□ 0.4
CMTM3-208ENST00000564247 SIK2Q9H0K1 926 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 TRPV5Q9NQA5 729 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 GPATCH2LQ9NWQ4 482 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 OBP2AQ9NY56 170 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 STIM2Q9P246 746 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 MIA3Q5JRA6 1907 aa17.52■□□□□ 0.4
CMTM3-208ENST00000564247 COL4A2P08572 1712 aa17.52■□□□□ 0.39
CMTM3-208ENST00000564247 TICRRQ7Z2Z1 1910 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 H3BRJ5 948 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 LEFTY2O00292 366 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 CES2O00748 559 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 CEP104O60308 925 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 ACSL4O60488 711 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 LATS1O95835 1130 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 PYGMP11217 842 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 CORO1AP31146 461 aaKnown RBP17.51■□□□□ 0.39
CMTM3-208ENST00000564247 GDI1P31150 447 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 CXCR5P32302 372 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 MLLT6P55198 1093 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-208ENST00000564247 FCHO2Q0JRZ9 810 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 TCF15Q12870 199 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 DPYSL2Q16555 572 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 PPP6R3Q5H9R7 873 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-208ENST00000564247 LRRC31Q6UY01 552 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 CYP4V2Q6ZWL3 525 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-208ENST00000564247 DENND1CQ8IV53 801 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 CELF5Q8N6W0 485 aaKnown RBP17.51■□□□□ 0.39
CMTM3-208ENST00000564247 SH3RF2Q8TEC5 729 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 RAPGEF5Q92565 580 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 ZFRQ96KR1 1074 aaKnown RBP17.51■□□□□ 0.39
CMTM3-208ENST00000564247 EPAS1Q99814 870 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 CALN1Q9BXU9 219 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 KIF9Q9HAQ2 790 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 TMPRSS4Q9NRS4 437 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 KLHL11Q9NVR0 708 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 CFAP97Q9P2B7 532 aa17.51■□□□□ 0.39
CMTM3-208ENST00000564247 OR12D3Q9UGF7 316 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms