RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ACTRT1Q8TDG2 376 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 COG1Q8WTW3 980 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 FGF13Q92913 245 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 ZSWIM3Q96MP5 696 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 NECTIN4Q96NY8 510 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 KCTD15Q96SI1 283 aaPredicted RBP13.35□□□□□ -0.27
SPG7-209ENST00000564047 ZNF670Q9BS34 389 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 KIF9Q9HAQ2 790 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 TDP1Q9NUW8 608 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 GDE1Q9NZC3 331 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 XPO7Q9UIA9 1087 aaKnown RBP13.35□□□□□ -0.27
SPG7-209ENST00000564047 CD207Q9UJ71 328 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 CDC23Q9UJX2 597 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 STOML2Q9UJZ1 356 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 LSM7Q9UK45 103 aaKnown RBP13.35□□□□□ -0.27
SPG7-209ENST00000564047 CDH7Q9ULB5 785 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 TTC7AQ9ULT0 858 aaPredicted RBP13.35□□□□□ -0.27
SPG7-209ENST00000564047 EFR3BQ9Y2G0 817 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 ZNF510Q9Y2H8 683 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 HS3ST4Q9Y661 456 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 VPS13AQ96RL7 3174 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 H3BRJ5 948 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 LEFTY2O00292 366 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 ZNF185O15231 689 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 GREM1O60565 184 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 KLKB1P03952 638 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 CD48P09326 243 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 IRF1P10914 325 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 IL4RP24394 825 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 ARL4AP40617 200 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 HCAR3P49019 387 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 CBX2Q14781 532 aaPredicted RBP13.34□□□□□ -0.27
SPG7-209ENST00000564047 ELF2Q15723 593 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 TFDP3Q5H9I0 405 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 PPP6R3Q5H9R7 873 aaPredicted RBP13.34□□□□□ -0.27
SPG7-209ENST00000564047 MS4A13Q5J8X5 152 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 PIK3R6Q5UE93 754 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 POTEHQ6S545 545 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 Q6ZNB5 142 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 GET4Q7L5D6 327 aaPredicted RBP13.34□□□□□ -0.27
SPG7-209ENST00000564047 CREG2Q8IUH2 290 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 DENND1CQ8IV53 801 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
SPG7-209ENST00000564047 PYROXD2Q8N2H3 581 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 KIAA1958Q8N8K9 716 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 ZSCAN18Q8TBC5 510 aaPredicted RBP13.34□□□□□ -0.27
SPG7-209ENST00000564047 SH3RF2Q8TEC5 729 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 USP13Q92995 863 aaPredicted RBP13.34□□□□□ -0.27
SPG7-209ENST00000564047 WBP2Q969T9 261 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 FAF2Q96CS3 445 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 EPAS1Q99814 870 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 DDX50Q9BQ39 737 aaKnown RBP13.34□□□□□ -0.27
SPG7-209ENST00000564047 CALN1Q9BXU9 219 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 MAGEB5Q9BZ81 275 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 OSBPL8Q9BZF1 889 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 PRDM16Q9HAZ2 1276 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 CFAP97Q9P2B7 532 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 OR12D3Q9UGF7 316 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 CDH22Q9UJ99 828 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 AGO1Q9UL18 857 aaKnown RBP13.34□□□□□ -0.27
SPG7-209ENST00000564047 SH3BP1Q9Y3L3 701 aa13.34□□□□□ -0.27
SPG7-209ENST00000564047 hCG_1818297A0A087WSY0 165 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 E2F8A0AVK6 867 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 FAM72CH0Y354 149 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 EEF2KO00418 725 aaKnown RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 LRIG2O94898 1065 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 PRAMEF12O95522 483 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 H2AFXP16104 143 aaPredicted RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 AUHQ13825 339 aaKnown RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 WHAMMP3Q1A5X7 153 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 FAM72AQ5TYM5 149 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 MANEALQ5VSG8 457 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 FAM72DQ6L9T8 149 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 AADACL2Q6P093 401 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 ANKS1BQ7Z6G8 1248 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 FAM72BQ86X60 149 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 SLC13A5Q86YT5 568 aaPredicted RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 CELF5Q8N6W0 485 aaKnown RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 CEP112Q8N8E3 955 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 PRSS33Q8NF86 280 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 SUSD6Q92537 303 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 UBXN4Q92575 508 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 SMARCD2Q92925 531 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 CSPG4P5Q96PW8 444 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 RNF157Q96PX1 679 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 NAP1L3Q99457 506 aaPredicted RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 PRMT1Q99873 361 aaKnown RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 CARD6Q9BX69 1037 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 MAK16Q9BXY0 300 aaKnown RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 SIK2Q9H0K1 926 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 SMG9Q9H0W8 520 aaKnown RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 TRPV4Q9HBA0 871 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 CWC15Q9P013 229 aaKnown RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 CCL26Q9Y258 94 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 SNX10Q9Y5X0 201 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 ZFP37Q9Y6Q3 630 aaPredicted RBP13.33□□□□□ -0.28
SPG7-209ENST00000564047 OBSL1O75147 1896 aa13.33□□□□□ -0.28
SPG7-209ENST00000564047 NOTCH4Q99466 2003 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 DCHS1Q96JQ0 3298 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms