RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ZBTB16Q05516 673 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 SFMBT2Q5VUG0 894 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 TMEM215Q68D42 235 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 VCPIP1Q96JH7 1222 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 CYLDQ9NQC7 956 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 MAN1B1Q9UKM7 699 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 CLEC4EQ9ULY5 219 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 SSUH2Q9Y2M2 353 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 TP53BP1Q12888 1972 aaPredicted RBP16.64■□□□□ 0.25
RNF40-205ENST00000563909 ZNF233A6NK53 670 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 KIAA0391O15091 583 aaKnown RBP16.64■□□□□ 0.25
RNF40-205ENST00000563909 MDM4O15151 490 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 PLA2G4AP47712 749 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 LSSP48449 732 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 SURF1Q15526 300 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 KNOP1Q1ED39 458 aaKnown RBP16.64■□□□□ 0.25
RNF40-205ENST00000563909 FNDC3BQ53EP0 1204 aaKnown RBP16.64■□□□□ 0.25
RNF40-205ENST00000563909 PAQR9Q6ZVX9 377 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 FAM35AQ86V20 835 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 NELFCDQ8IXH7 590 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 GANCQ8TET4 914 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 POLR1BQ9H9Y6 1135 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 EBF2Q9HAK2 575 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 THSD1Q9NS62 852 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 OSER1Q9NX31 292 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 CGNQ9P2M7 1197 aaKnown RBP16.64■□□□□ 0.25
RNF40-205ENST00000563909 NUDT5Q9UKK9 219 aa16.64■□□□□ 0.25
RNF40-205ENST00000563909 PLXNA2O75051 1894 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 WNT9AO14904 365 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 AP1G2O75843 785 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 KLKB1P03952 638 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 FAM163BP0C2L3 166 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 C7P10643 843 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 HOXD13P35453 343 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 CHKAP35790 457 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 PPP1R2P41236 205 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 TNNC1P63316 161 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 PROX2Q3B8N5 592 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 TTC31Q49AM3 519 aaPredicted RBP16.63■□□□□ 0.25
RNF40-205ENST00000563909 COBLL1Q53SF7 1204 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 CCDC81Q6ZN84 652 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 CBWD2Q8IUF1 395 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 GUF1Q8N442 669 aaKnown RBP16.63■□□□□ 0.25
RNF40-205ENST00000563909 GOLGA5Q8TBA6 731 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 SMARCD1Q96GM5 515 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 TMEM245Q9H330 911 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 FBXO44Q9H4M3 255 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 ASCL3Q9NQ33 180 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 PLA2G4CQ9UP65 541 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 NCKAP1Q9Y2A7 1128 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 AHCTF1Q8WYP5 2266 aa16.63■□□□□ 0.25
RNF40-205ENST00000563909 NBPF19A0A087WUL8 3843 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 A0A1W2PR77 199 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 TLR4O00206 839 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 STC2O76061 302 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
RNF40-205ENST00000563909 MYF5P13349 255 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 RXRGP48443 463 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 STIM1Q13586 685 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 MORC3Q14149 939 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 UBAP2LQ14157 1087 aaKnown RBP16.62■□□□□ 0.25
RNF40-205ENST00000563909 SKOR2Q2VWA4 1001 aaPredicted RBP16.62■□□□□ 0.25
RNF40-205ENST00000563909 C10orf120Q5SQS8 335 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 CCDC183Q5T5S1 534 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 ISM2Q6H9L7 571 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 TRAPPC11Q7Z392 1133 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 KANSL1Q7Z3B3 1105 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 WDR49Q8IV35 697 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 CYB5D2Q8WUJ1 264 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
RNF40-205ENST00000563909 DEPDC7Q96QD5 511 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 PRSS16Q9NQE7 514 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 KRT82Q9NSB4 513 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 ZNF510Q9Y2H8 683 aa16.62■□□□□ 0.25
RNF40-205ENST00000563909 BIN1O00499 593 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 PDXKO00764 312 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 CYP26A1O43174 497 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 TGFB1I1O43294 461 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 SUV39H1O43463 412 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 SIGLEC6O43699 453 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 AFPP02771 609 aaKnown RBP16.61■□□□□ 0.25
RNF40-205ENST00000563909 CYBBP04839 570 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 RARGP13631 454 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 GALCP54803 685 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 NXPH1P58417 271 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 KLHL40Q2TBA0 621 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 CDCP2Q5VXM1 449 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 NCEH1Q6PIU2 408 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 SMOQ99835 787 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 SLC2A11Q9BYW1 496 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
RNF40-205ENST00000563909 ERVMER34-1Q9H9K5 563 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 FBRSQ9HAH7 460 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 STARD5Q9NSY2 213 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 MAPK8IP1Q9UQF2 711 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 RELNP78509 3460 aa16.61■□□□□ 0.25
RNF40-205ENST00000563909 TLN1Q9Y490 2541 aaKnown RBP16.61■□□□□ 0.25
RNF40-205ENST00000563909 USP9YO00507 2555 aaPredicted RBP16.61■□□□□ 0.25
RNF40-205ENST00000563909 TRIM38O00635 465 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms