RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 DDX42Q86XP3 938 aaKnown RBP eCLIP22.65■■□□□ 1.22
LINC01960-201ENST00000563759 RSAD2Q8WXG1 361 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 RNF38Q9H0F5 515 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 LMAN2LQ9H0V9 348 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 FAM114A2Q9NRY5 505 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 DTLQ9NZJ0 730 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 E9PAM4 449 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 IFNB1P01574 187 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 MYBL2P10244 700 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 MBL2P11226 248 aaPredicted RBP22.64■■□□□ 1.22
LINC01960-201ENST00000563759 MYL4P12829 197 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 CARSP49589 748 aaKnown RBP22.64■■□□□ 1.22
LINC01960-201ENST00000563759 HARS2P49590 506 aaKnown RBP22.64■■□□□ 1.22
LINC01960-201ENST00000563759 KCNQ1P51787 676 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 CYP4F8P98187 520 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 TRADDQ15628 312 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 MS4A13Q5J8X5 152 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 DUPD1Q68J44 220 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 CCNI2Q6ZMN8 369 aaPredicted RBP22.64■■□□□ 1.22
LINC01960-201ENST00000563759 BZW1Q7L1Q6 419 aaKnown RBP22.64■■□□□ 1.22
LINC01960-201ENST00000563759 ADGRD2Q7Z7M1 963 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 SEC14L1Q92503 715 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 PLD4Q96BZ4 506 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 C1orf74Q96LT6 269 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 C10orf88Q9H8K7 445 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 HCFC2Q9Y5Z7 792 aa22.64■■□□□ 1.22
LINC01960-201ENST00000563759 FGF10O15520 208 aaPredicted RBP22.64■■□□□ 1.21
LINC01960-201ENST00000563759 KRT14P02533 472 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 HOXA9P31269 272 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 BMP8BP34820 402 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 SERPINB6P35237 376 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 VPS41P49754 854 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 MLLT6P55198 1093 aaPredicted RBP22.64■■□□□ 1.21
LINC01960-201ENST00000563759 NRG1Q02297 640 aaPredicted RBP22.64■■□□□ 1.21
LINC01960-201ENST00000563759 PAFAH1B3Q15102 231 aaKnown RBP22.64■■□□□ 1.21
LINC01960-201ENST00000563759 MANEALQ5VSG8 457 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 TXNDC8Q6A555 127 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 PDZD4Q76G19 769 aaPredicted RBP22.64■■□□□ 1.21
LINC01960-201ENST00000563759 CCDC89Q8N998 374 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 LRRC3Q9BY71 257 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 ATXN3LQ9H3M9 355 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 CATSPERBQ9H7T0 1116 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 VANGL2Q9ULK5 521 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 NFU1Q9UMS0 254 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 NEU3Q9UQ49 428 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 SNX24Q9Y343 169 aa22.64■■□□□ 1.21
LINC01960-201ENST00000563759 A0A1W2PRU2 124 aa22.63■■□□□ 1.21
LINC01960-201ENST00000563759 XYLBO75191 536 aa22.63■■□□□ 1.21
LINC01960-201ENST00000563759 SLC10A2Q12908 348 aaPredicted RBP22.63■■□□□ 1.21
LINC01960-201ENST00000563759 ACBD5Q5T8D3 534 aaPredicted RBP22.63■■□□□ 1.21
LINC01960-201ENST00000563759 B4GALNT4Q76KP1 1039 aa22.63■■□□□ 1.21
LINC01960-201ENST00000563759 CDKL3Q8IVW4 592 aaPredicted RBP22.63■■□□□ 1.21
LINC01960-201ENST00000563759 CCDC33Q8N5R6 958 aa22.63■■□□□ 1.21
LINC01960-201ENST00000563759 CCHCR1Q8TD31 782 aa22.63■■□□□ 1.21
LINC01960-201ENST00000563759 TLE6Q9H808 572 aa22.63■■□□□ 1.21
LINC01960-201ENST00000563759 HCFC1R1Q9NWW0 138 aa22.63■■□□□ 1.21
LINC01960-201ENST00000563759 NOTCH4Q99466 2003 aa22.63■■□□□ 1.21
LINC01960-201ENST00000563759 CLUHO75153 1309 aa22.63■■□□□ 1.21
LINC01960-201ENST00000563759 BHMG1C9JSJ3 638 aaPredicted RBP22.62■■□□□ 1.21
LINC01960-201ENST00000563759 HNRNPA1P09651 372 aaKnown RBP eCLIP22.62■■□□□ 1.21
LINC01960-201ENST00000563759 IRF1P10914 325 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 HOXC13P31276 330 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 XRCC4Q13426 336 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 RAP1GAP2Q684P5 730 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 LRRC31Q6UY01 552 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 CHSY1Q86X52 802 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 ARL14EPQ8N8R7 260 aaPredicted RBP22.62■■□□□ 1.21
LINC01960-201ENST00000563759 ARFGAP3Q9NP61 516 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 SMPD4Q9NXE4 827 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 MYO18AQ92614 2054 aaKnown RBP22.62■■□□□ 1.21
LINC01960-201ENST00000563759 EPOPA6NHQ4 379 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 HDCP19113 662 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 ADCY8P40145 1251 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 RPL21P46778 160 aaKnown RBP22.62■■□□□ 1.21
LINC01960-201ENST00000563759 SLC11A2P49281 568 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 GDF10P55107 478 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 AUHQ13825 339 aaKnown RBP22.62■■□□□ 1.21
LINC01960-201ENST00000563759 PRUNE1Q86TP1 453 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 FAM71DQ8N9W8 422 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 TIFAQ96CG3 184 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 OLFM3Q96PB7 478 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 CYP2S1Q96SQ9 504 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 PCDH9Q9HC56 1237 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 NEU2Q9Y3R4 380 aa22.62■■□□□ 1.21
LINC01960-201ENST00000563759 C2orf16Q68DN1 1984 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 CFAP69A5D8W1 941 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 STC2O76061 302 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 FGF19O95750 216 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 CKMP06732 381 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 PTPN2P17706 415 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 NRIP1P48552 1158 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 CALCOCO2Q13137 446 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 SLC45A4Q5BKX6 768 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 ZNF697Q5TEC3 545 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 C14orf80Q86SX3 495 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 NPWQ8N729 165 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 MAB21L3Q8N8X9 362 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 GLIS1Q8NBF1 620 aa22.61■■□□□ 1.21
LINC01960-201ENST00000563759 HNRNPLLQ8WVV9 542 aaKnown RBP22.61■■□□□ 1.21
LINC01960-201ENST00000563759 SNF8Q96H20 258 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms