RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ZBTB26Q9HCK0 441 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 MYO1AQ9UBC5 1043 aa5.67□□□□□ -1.5
LINC00254-201ENST00000563416 KDM6AO15550 1401 aaPredicted RBP5.66□□□□□ -1.5
LINC00254-201ENST00000563416 SRCAPQ6ZRS2 3230 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 A0A1W2PPC4 97 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 TISP43B9A030 160 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 PRRT4C9JH25 899 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 AGPSO00116 658 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 SPRY2O43597 315 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 CCNT2O60583 730 aaKnown RBP5.66□□□□□ -1.5
LINC00254-201ENST00000563416 COQ9O75208 318 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 CDK4P11802 303 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 NTSR1P30989 418 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 DIO1P49895 249 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 ALDH5A1P51649 535 aaPredicted RBP5.66□□□□□ -1.5
LINC00254-201ENST00000563416 COPAP53621 1224 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 EIF4A1P60842 406 aaKnown RBP5.66□□□□□ -1.5
LINC00254-201ENST00000563416 PSG6Q00889 435 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 FAM187BQ17R55 369 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 USP49Q70CQ1 688 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 BCDIN3DQ7Z5W3 292 aaKnown RBP5.66□□□□□ -1.5
LINC00254-201ENST00000563416 CHSY1Q86X52 802 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 RNF152Q8N8N0 203 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 C11orf44Q8N8P7 122 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 MBD3L2Q8NHZ7 208 aaPredicted RBP5.66□□□□□ -1.5
LINC00254-201ENST00000563416 SELENOOQ9BVL4 669 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 NAA15Q9BXJ9 866 aaKnown RBP5.66□□□□□ -1.5
LINC00254-201ENST00000563416 TMOD4Q9NZQ9 345 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 VPS51Q9UID3 782 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 SLC27A6Q9Y2P4 619 aa5.66□□□□□ -1.5
LINC00254-201ENST00000563416 MT-CO3P00414 261 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 MYL3P08590 195 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 TMEM225BP0DP42 221 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 ADRA1DP25100 572 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 ATICP31939 592 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 FOXF2Q12947 444 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 DDX10Q13206 875 aaKnown RBP5.65□□□□□ -1.5
LINC00254-201ENST00000563416 DHX8Q14562 1220 aaKnown RBP5.65□□□□□ -1.5
LINC00254-201ENST00000563416 RALBP1Q15311 655 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 EZH2Q15910 746 aaKnown RBP5.65□□□□□ -1.5
LINC00254-201ENST00000563416 HSP90AB4PQ58FF6 505 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 FAXCQ5TGI0 409 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 KRT73Q86Y46 540 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 PNPLA1Q8N8W4 532 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 ABHD5Q8WTS1 349 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 WDYHV1Q96HA8 205 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 HS6ST2Q96MM7 605 aa5.65□□□□□ -1.5
LINC00254-201ENST00000563416 COL15A1P39059 1388 aa5.65□□□□□ -1.51
LINC00254-201ENST00000563416 CGB1A6NKQ9 187 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 TMEM232C9JQI7 657 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 LATS1O95835 1130 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 TUBB4AP04350 444 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 CELA2AP08217 269 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 IFIT2P09913 472 aaKnown RBP5.64□□□□□ -1.51
LINC00254-201ENST00000563416 NHLRC4P0CG21 123 aaPredicted RBP5.64□□□□□ -1.51
LINC00254-201ENST00000563416 CYP2D6P10635 497 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 COPB1P53618 953 aaKnown RBP5.64□□□□□ -1.51
LINC00254-201ENST00000563416 AK2P54819 239 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 TXNL4AP83876 142 aaKnown RBP5.64□□□□□ -1.51
LINC00254-201ENST00000563416 GPS1Q13098 491 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 ZRSR2Q15696 482 aaKnown RBP5.64□□□□□ -1.51
LINC00254-201ENST00000563416 SRSF7Q16629 238 aaKnown RBP eCLIP5.64□□□□□ -1.51
LINC00254-201ENST00000563416 LONRF1Q17RB8 773 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 ARL13BQ3SXY8 428 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 ZKSCAN2Q63HK3 967 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 SULT6B1Q6IMI4 303 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 MRNIPQ6NTE8 343 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 TMEM65Q6PI78 240 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 TMED8Q6PL24 325 aaPredicted RBP5.64□□□□□ -1.51
LINC00254-201ENST00000563416 CRTC1Q6UUV9 634 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 P3H2Q8IVL5 708 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 TXLNBQ8N3L3 684 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 METTL25Q8N6Q8 603 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 BRI3BPQ8WY22 251 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 DDB2Q92466 427 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 RITA1Q96K30 269 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 TNIP3Q96KP6 325 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 SNX27Q96L92 541 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 CHST12Q9NRB3 414 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 LPAR3Q9UBY5 353 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 BCORQ6W2J9 1755 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 KIF13BQ9NQT8 1826 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 CACNA1FO60840 1977 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 KCPQ6ZWJ8 1503 aa5.64□□□□□ -1.51
LINC00254-201ENST00000563416 RASA4BC9J798 803 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 PPP6CO00743 305 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 RASA4O43374 803 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 KCNQ3O43525 872 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 WDR47O94967 919 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 TNFSF4P23510 183 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 EPHB2P29323 1055 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 TM4SF4P48230 202 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 DGKQP52824 942 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 CFHR3Q02985 330 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 PLEKHO1Q53GL0 409 aaPredicted RBP5.63□□□□□ -1.51
LINC00254-201ENST00000563416 FAM209BQ5JX69 171 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 VSTM1Q6UX27 236 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 C12orf76Q8N812 135 aaPredicted RBP5.63□□□□□ -1.51
LINC00254-201ENST00000563416 CFAP53Q96M91 514 aa5.63□□□□□ -1.51
LINC00254-201ENST00000563416 CINPQ9BW66 212 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms