RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CXCL12P48061 93 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 CCR3P51677 355 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 RPL7AP62424 266 aaKnown RBP8.85□□□□□ -0.99
UBR1-204ENST00000563239 MRPS21P82921 87 aaKnown RBP8.85□□□□□ -0.99
UBR1-204ENST00000563239 OGDHQ02218 1023 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 DEUP1Q05D60 604 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 MAMLD1Q13495 774 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 C15orf59Q2T9L4 293 aaPredicted RBP8.85□□□□□ -0.99
UBR1-204ENST00000563239 ASTE1Q2TB18 679 aaPredicted RBP8.85□□□□□ -0.99
UBR1-204ENST00000563239 ZNF528Q3MIS6 628 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 C5orf22Q49AR2 442 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 C2orf27AQ580R0 203 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 C10orf76Q5T2E6 689 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 MPP7Q5T2T1 576 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 PLEKHA7Q6IQ23 1121 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 FBXL22Q6P050 247 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 LGI2Q8N0V4 545 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 CFAP52Q8N1V2 620 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 CCDC33Q8N5R6 958 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 ALLCQ8N6M5 410 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.85□□□□□ -0.99
UBR1-204ENST00000563239 ATP6V0D2Q8N8Y2 350 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 IGSF8Q969P0 613 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 VCPIP1Q96JH7 1222 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 ACOX2Q99424 681 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 SLC2A11Q9BYW1 496 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 TKTL2Q9H0I9 626 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 ISCUQ9H1K1 167 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 CD248Q9HCU0 757 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 ADAMTS1Q9UHI8 967 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 STAP1Q9ULZ2 295 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 SNX10Q9Y5X0 201 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 HS3ST4Q9Y661 456 aa8.85□□□□□ -0.99
UBR1-204ENST00000563239 BZW2Q9Y6E2 419 aaKnown RBP8.85□□□□□ -0.99
UBR1-204ENST00000563239 SGK1O00141 431 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 ATMINO43313 823 aaPredicted RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 ATG13O75143 517 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 RTN2O75298 545 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 KLF8O95600 359 aaPredicted RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 F9P00740 461 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 ABCB4P21439 1286 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 HOXA6P31267 233 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 CD70P32970 193 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 RDXP35241 583 aaKnown RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 TIE1P35590 1138 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 GGCXP38435 758 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 NBL1P41271 181 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 ADKP55263 362 aaKnown RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 HDAC4P56524 1084 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 ATP11AP98196 1134 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 AUHQ13825 339 aaKnown RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 TRIM14Q14142 442 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 DMC1Q14565 340 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 FSCBQ5H9T9 825 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 BRMS1LQ5PSV4 323 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 EGFLAMQ63HQ2 1017 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 DNAJC24Q6P3W2 148 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 TMEM92Q6UXU6 159 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 SYT13Q7L8C5 426 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 ADIPOR2Q86V24 386 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 CHSY1Q86X52 802 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 CIR1Q86X95 450 aaPredicted RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 FAM131BQ86XD5 332 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 DRC7Q8IY82 874 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 TXNDC5Q8NBS9 432 aaKnown RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 HJURPQ8NCD3 748 aaPredicted RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 ZBTB44Q8NCP5 570 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 OR8K1Q8NGG5 319 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 FIBINQ8TAL6 211 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 KCNV2Q8TDN2 545 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 ATOH1Q92858 354 aaPredicted RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 RNF34Q969K3 372 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 DDX50Q9BQ39 737 aaKnown RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 SELENOOQ9BVL4 669 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 MAGEB5Q9BZ81 275 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 TRIM7Q9C029 511 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 WDCPQ9H6R7 721 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 STIM2Q9P246 746 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 INTS6Q9UL03 887 aaKnown RBP8.84□□□□□ -0.99
UBR1-204ENST00000563239 MMP17Q9ULZ9 603 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 ATG2BQ96BY7 2078 aa8.84□□□□□ -0.99
UBR1-204ENST00000563239 A0A1W2PQF6 199 aa8.83□□□□□ -1
UBR1-204ENST00000563239 TMEM191CA6NGB0 347 aa8.83□□□□□ -1
UBR1-204ENST00000563239 DRGXA6NNA5 263 aa8.83□□□□□ -1
UBR1-204ENST00000563239 PROB1E7EW31 1015 aa8.83□□□□□ -1
UBR1-204ENST00000563239 F5H5T6 163 aa8.83□□□□□ -1
UBR1-204ENST00000563239 CCP110O43303 1012 aa8.83□□□□□ -1
UBR1-204ENST00000563239 LILRB5O75023 590 aa8.83□□□□□ -1
UBR1-204ENST00000563239 MFAP3LO75121 409 aa8.83□□□□□ -1
UBR1-204ENST00000563239 LUC7L3O95232 432 aaKnown RBP8.83□□□□□ -1
UBR1-204ENST00000563239 GPD1P21695 349 aa8.83□□□□□ -1
UBR1-204ENST00000563239 SDC4P31431 198 aa8.83□□□□□ -1
UBR1-204ENST00000563239 EIF4A3P38919 411 aaKnown RBP8.83□□□□□ -1
UBR1-204ENST00000563239 PXNP49023 591 aaPredicted RBP8.83□□□□□ -1
UBR1-204ENST00000563239 FNTBP49356 437 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ZNF75DP51815 510 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ZNF143P52747 638 aaPredicted RBP8.83□□□□□ -1
UBR1-204ENST00000563239 FOXK2Q01167 660 aa8.83□□□□□ -1
UBR1-204ENST00000563239 ZNF252P-AS1Q0IIN9 211 aa8.83□□□□□ -1
UBR1-204ENST00000563239 LMAN2Q12907 356 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms