RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PIP5K1AQ99755 562 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 GORASP1Q9BQQ3 440 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 MRPL37Q9BZE1 423 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 SLC5A7Q9GZV3 580 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 TTYH1Q9H313 450 aaPredicted RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 ABHD16BQ9H3Z7 469 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 RC3H2Q9HBD1 1191 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 LTB4R2Q9NPC1 389 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 PCDHB16Q9NRJ7 776 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 TMPRSS4Q9NRS4 437 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 SIRT3Q9NTG7 399 aaPredicted RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 SPASTQ9UBP0 616 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 MORF4L1Q9UBU8 362 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 INTS6Q9UL03 887 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 OGDHLQ9ULD0 1010 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 RNF112Q9ULX5 631 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 PCDHA10Q9Y5I2 948 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 TONSLQ96HA7 1378 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 MED7O43513 233 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 VNN2O95498 520 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 IGHEP01854 428 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 CKMP06732 381 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 LIPFP07098 398 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 PRKAR1AP10644 381 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 SELLP14151 372 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 ADD1P35611 737 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 IDH3AP50213 366 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 NPY4RP50391 375 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 TNFRSF17Q02223 184 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 RPL6Q02878 288 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 TRAP1Q12931 704 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 CSTF3Q12996 717 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 RAPSNQ13702 412 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 THOC5Q13769 683 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 KARSQ15046 597 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 BCL2A1Q16548 175 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 Q4G0T1 1027 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 C3orf38Q5JPI3 329 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 TWF2Q6IBS0 349 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 CABP7Q86V35 215 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 GAS2L3Q86XJ1 694 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 CHST14Q8NCH0 376 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 OR2T34Q8NGX1 318 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 PIP4K2CQ8TBX8 421 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 DNAAF4Q8WXU2 420 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 LRRC39Q96DD0 335 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 IQCDQ96DY2 449 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 C1orf159Q96HA4 380 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 GCNAQ96QF7 691 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 HHIPQ96QV1 700 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 MIPEPQ99797 713 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 TSG101Q99816 390 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 FAM118BQ9BPY3 351 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 TDRD1Q9BXT4 1180 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 GON7Q9BXV9 100 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 GPR62Q9BZJ7 368 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 CCSER1Q9C0I3 900 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 RNF32Q9H0A6 362 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 MRPL47Q9HD33 250 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 TBX20Q9UMR3 447 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 PLAGL2Q9UPG8 496 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 ABCC3O15438 1527 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 PRXQ9BXM0 1461 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 PTPN23Q9H3S7 1636 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 ATP7AQ04656 1500 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ARHGEF37A1IGU5 675 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ATP5HO75947 161 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 GALTP07902 379 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ACAA1P09110 424 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 BRAFP15056 766 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SLC9A1P19634 815 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CHRNA3P32297 505 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ICAM3P32942 547 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MDH1P40925 334 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 CETN2P41208 172 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MAPKAPK2P49137 400 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 HSD17B4P51659 736 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MAP2K6P52564 334 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ERVFC1P60507 584 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 TPM4P67936 248 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SMAD3P84022 425 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 CYP27A1Q02318 531 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 GCNT1Q02742 428 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 PPIL2Q13356 520 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CYLC2Q14093 348 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 RAB3GAP1Q15042 981 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 AGERQ15109 404 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SEC23BQ15437 767 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 KLHL24Q6TFL4 600 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 THSD4Q6ZMP0 1018 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ZNF852Q6ZMS4 543 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 CCDC105Q8IYK2 499 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 AOPEPQ8N6M6 819 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 GLIS1Q8NBF1 620 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 XXYLT1Q8NBI6 393 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 METTL6Q8TCB7 284 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 KAT2AQ92830 837 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 FBXO32Q969P5 355 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 HES6Q96HZ4 224 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 PIWIL1Q96J94 861 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms