RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 LRRN4Q8WUT4 740 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 UCMAQ8WVF2 138 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 CMTM5Q96DZ9 223 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 IFT43Q96FT9 208 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 PPP1R16BQ96T49 567 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 TRIM56Q9BRZ2 755 aaKnown RBP13.45□□□□□ -0.26
USB1-207ENST00000563149 VCX3BQ9H321 246 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 VTA1Q9NP79 307 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 COPG2Q9UBF2 871 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 RAD54BQ9Y620 910 aa13.45□□□□□ -0.26
USB1-207ENST00000563149 SMIM24O75264 130 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 RALBP11234 206 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 LCP1P13796 627 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 TUBP50607 506 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 ATXN1P54253 815 aaKnown RBP13.44□□□□□ -0.26
USB1-207ENST00000563149 BTKQ06187 659 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 HNRNPDQ14103 355 aaKnown RBP13.44□□□□□ -0.26
USB1-207ENST00000563149 PAFAH1B3Q15102 231 aaKnown RBP13.44□□□□□ -0.26
USB1-207ENST00000563149 TAPT1Q6NXT6 567 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 SLC27A1Q6PCB7 646 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 PGM2L1Q6PCE3 622 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 ARMCX2Q7L311 632 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 FASTKD5Q7L8L6 764 aaKnown RBP13.44□□□□□ -0.26
USB1-207ENST00000563149 C7orf31Q8N865 590 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 OR6Y1Q8NGX8 325 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 ACTRT2Q8TDY3 377 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 SREK1Q8WXA9 508 aaKnown RBP13.44□□□□□ -0.26
USB1-207ENST00000563149 PPP2R3CQ969Q6 453 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 P2RY11Q96G91 374 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 ECSITQ9BQ95 431 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 FAM192AQ9GZU8 254 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 S100A14Q9HCY8 104 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 ZDHHC7Q9NXF8 308 aa13.44□□□□□ -0.26
USB1-207ENST00000563149 UBQLN1Q9UMX0 589 aaKnown RBP13.44□□□□□ -0.26
USB1-207ENST00000563149 UNCXA6NJT0 531 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 EIF4E1BA6NMX2 242 aaKnown RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 RNF103O00237 685 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 XPO1O14980 1071 aaKnown RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 SIN3BO75182 1162 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 H2AFYO75367 372 aaKnown RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 DAB1O75553 588 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 LYPLA1O75608 230 aaPredicted RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 CD4P01730 458 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 MPOP05164 745 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 ADORA2AP29274 412 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 TYK2P29597 1187 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 SPRP35270 261 aaPredicted RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 SULT1E1P49888 294 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 IDH3AP50213 366 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 CACNA2D1P54289 1103 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 SESN2P58004 480 aaPredicted RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 RPL26P61254 145 aaKnown RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 IRX4P78413 519 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 IFRD2Q12894 506 aaPredicted RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 FSCBQ5H9T9 825 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 FAM182AQ5T1J6 154 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 METTL21CQ5VZV1 264 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 C9orf57Q5W0N0 161 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 RASSF3Q86WH2 238 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 C10orf107Q8IVU9 208 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 KBTBD2Q8IY47 623 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 CCDC33Q8N5R6 958 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 CLEC4CQ8WTT0 213 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 CERS2Q96G23 380 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 OTUD5Q96G74 571 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 CLPTM1LQ96KA5 538 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 ZMAT2Q96NC0 199 aaKnown RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 SORT1Q99523 831 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 C16orf70Q9BSU1 422 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 LRRC40Q9H9A6 602 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 GDAP2Q9NXN4 497 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 SNTG2Q9NY99 539 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 IL1RAPL1Q9NZN1 696 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 SCN4AP35499 1836 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 TMEM114B3SHH9 223 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 PPEF2O14830 753 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 XPOTO43592 962 aaKnown RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 MFSD11O43934 449 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 TOP3BO95985 862 aaKnown RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 PRKCGP05129 697 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 CPA3P15088 417 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 ADORA2BP29275 332 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 NOS2P35228 1153 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 GNL1P36915 607 aaPredicted RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 PEX19P40855 299 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 PNPLA4P41247 253 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 SERPINB8P50452 374 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 AIF1P55008 147 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 PPIL2Q13356 520 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 NAIF1Q69YI7 327 aaPredicted RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 PDPK2PQ6A1A2 396 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 MAMDC4Q6UXC1 1216 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 ALKAL1Q6UXT8 129 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 RFX8Q6ZV50 586 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 PDZD4Q76G19 769 aaPredicted RBP13.43□□□□□ -0.26
USB1-207ENST00000563149 BNIPLQ7Z465 357 aa13.43□□□□□ -0.26
USB1-207ENST00000563149 ANKRD13AQ8IZ07 590 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms