RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 PIGVQ9NUD9 493 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 EBF1Q9UH73 591 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 GGA2Q9UJY4 613 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 GMEB2Q9UKD1 530 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 FAM186AA6NE01 2351 aa16.71■□□□□ 0.26
COMMD4-206ENST00000562610 PABPC1P11940 636 aaKnown RBP16.7■□□□□ 0.26
COMMD4-206ENST00000562610 UNGP13051 313 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-206ENST00000562610 DEUP1Q05D60 604 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 EIF4EBP2Q13542 120 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-206ENST00000562610 NFKBIBQ15653 356 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 SFMBT2Q5VUG0 894 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 CHST9Q7L1S5 443 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 RASSF3Q86WH2 238 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 AHI1Q8N157 1196 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 EMC1Q8N766 993 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 WFIKKN2Q8TEU8 576 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 SORCS1Q8WY21 1168 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 CFAP57Q96MR6 1250 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 TSPY26PQ9H489 355 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 ELOVL2Q9NXB9 296 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 ADAM22Q9P0K1 906 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 CALCOCO1Q9P1Z2 691 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 PAXBP1Q9Y5B6 917 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 RAD54BQ9Y620 910 aa16.7■□□□□ 0.26
COMMD4-206ENST00000562610 OTOGLQ3ZCN5 2332 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 WASH3PC4AMC7 463 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 H0Y626 953 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 CALB1P05937 261 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 CD70P32970 193 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 GGCXP38435 758 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 STARD3Q14849 445 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 E2F5Q15329 346 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 SLC25A52Q3SY17 297 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 RABGAP1LQ5R372 815 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 TMEM215Q68D42 235 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 LAIR1Q6GTX8 287 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 TRNP1Q6NT89 227 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 CIR1Q86X95 450 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-206ENST00000562610 GABRG3Q99928 467 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 ADAM33Q9BZ11 813 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 TTYH3Q9C0H2 523 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 IFNKQ9P0W0 207 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 TMEM59LQ9UK28 342 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 INVSQ9Y283 1065 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 STON1Q9Y6Q2 735 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 ABCA7Q8IZY2 2146 aa16.69■□□□□ 0.26
COMMD4-206ENST00000562610 NPC1O15118 1278 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 ZBTB24O43167 697 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-206ENST00000562610 PAGE1O75459 146 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 LUC7L3O95232 432 aaKnown RBP16.68■□□□□ 0.26
COMMD4-206ENST00000562610 GJB6O95452 261 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 F9P00740 461 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 TNFAIP3P21580 790 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 IL12RB1P42701 662 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 ATP11AP98196 1134 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 MTA1Q13330 715 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 ZNF234Q14588 700 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 CDO1Q16878 200 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 FNDC3BQ53EP0 1204 aaKnown RBP16.68■□□□□ 0.26
COMMD4-206ENST00000562610 USP39Q53GS9 565 aaKnown RBP16.68■□□□□ 0.26
COMMD4-206ENST00000562610 BRMS1LQ5PSV4 323 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 RNF43Q68DV7 783 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 KIAA1211LQ6NV74 962 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 LRSAM1Q6UWE0 723 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 SERPINA13PQ6UXR4 307 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 IRF2BP2Q7Z5L9 587 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 KBTBD6Q86V97 674 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 PHF13Q86YI8 300 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-206ENST00000562610 DCLK2Q8N568 766 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 FAM160A2Q8N612 972 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-206ENST00000562610 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.68■□□□□ 0.26
COMMD4-206ENST00000562610 CYB5D2Q8WUJ1 264 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 SPACA7Q96KW9 195 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 RPRD1AQ96P16 312 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-206ENST00000562610 SELENOOQ9BVL4 669 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 TKTL2Q9H0I9 626 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 WDCPQ9H6R7 721 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 THAP10Q9P2Z0 257 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-206ENST00000562610 VANGL2Q9ULK5 521 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 HS3ST4Q9Y661 456 aa16.68■□□□□ 0.26
COMMD4-206ENST00000562610 RIF1Q5UIP0 2472 aaKnown RBP16.67■□□□□ 0.26
COMMD4-206ENST00000562610 A0A1W2PQF6 199 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 TMCO5BA8MYB1 307 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 DCLK1O15075 740 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 ADCY5O95622 1261 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 TPM3P06753 285 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 GABRG2P18507 467 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 POLR2EP19388 210 aaKnown RBP16.67■□□□□ 0.26
COMMD4-206ENST00000562610 SDC4P31431 198 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 RDXP35241 583 aaKnown RBP16.67■□□□□ 0.26
COMMD4-206ENST00000562610 CXCR3P49682 368 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 ATXN1P54253 815 aaKnown RBP16.67■□□□□ 0.26
COMMD4-206ENST00000562610 LMAN2Q12907 356 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 PTP4A2Q12974 167 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 FUT11Q495W5 492 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 TTC39BQ5VTQ0 682 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-206ENST00000562610 E4F1Q66K89 784 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-206ENST00000562610 MBLAC2Q68D91 279 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 MON1BQ7L1V2 547 aa16.67■□□□□ 0.26
COMMD4-206ENST00000562610 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms