RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 CRYABP02511 175 aaKnown RBP2.66□□□□□ -1.98
CHD9-204ENST00000561869 ALPLP05186 524 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 KRT18P05783 430 aaKnown RBP2.66□□□□□ -1.98
CHD9-204ENST00000561869 NBPF7P0C2Y1 421 aaPredicted RBP2.66□□□□□ -1.98
CHD9-204ENST00000561869 SNHG28P0DPA3 235 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 AKR1A1P14550 325 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 NPPBP16860 134 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 ABCB4P21439 1286 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 KLRK1P26718 216 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 SLC37A1P57057 533 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 FAM3BP58499 235 aaPredicted RBP2.66□□□□□ -1.98
CHD9-204ENST00000561869 NANOS2P60321 138 aaKnown RBP2.66□□□□□ -1.98
CHD9-204ENST00000561869 RPL15P61313 204 aaKnown RBP2.66□□□□□ -1.98
CHD9-204ENST00000561869 RAPGEF1Q13905 1077 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 UBE4AQ14139 1066 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 AAK1Q2M2I8 961 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 SMTNL2Q2TAL5 461 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 ODF3L2Q3SX64 289 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 ANXA2RQ3ZCQ2 193 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 GLE1Q53GS7 698 aaKnown RBP2.66□□□□□ -1.98
CHD9-204ENST00000561869 KIAA1755Q5JYT7 1200 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 PIK3CD-AS1Q5SR53 167 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 MANEAQ5SRI9 462 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 SLC39A5Q6ZMH5 540 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 KRT27Q7Z3Y8 459 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 TRABD2AQ86V40 505 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 PIM3Q86V86 326 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 SKAP1Q86WV1 359 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 ADGRF3Q8IZF5 1079 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 PAQR4Q8N4S7 273 aaPredicted RBP2.66□□□□□ -1.98
CHD9-204ENST00000561869 OR52N4Q8NGI2 321 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 EME1Q96AY2 570 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 EIF3CQ99613 913 aaKnown RBP2.66□□□□□ -1.98
CHD9-204ENST00000561869 MYD88Q99836 296 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 TUBB6Q9BUF5 446 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 FAM234AQ9H0X4 552 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 ERVK-5Q9HDB9 667 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 THSD1Q9NS62 852 aa2.66□□□□□ -1.98
CHD9-204ENST00000561869 CYP3A7-CYP3A51PA0A087WV96 503 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 TMEM272A0A1B0GTI8 110 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 H3BNX3 289 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 PRPF4O43172 522 aaKnown RBP eCLIP2.65□□□□□ -1.993e-7■■□□□ 12.9
CHD9-204ENST00000561869 RPP40O75818 363 aaKnown RBP2.65□□□□□ -1.99
CHD9-204ENST00000561869 CNTN5O94779 1100 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 MYL1P05976 194 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 CYP3A4P08684 503 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 PEPDP12955 493 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 CYP3A7P24462 503 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 CCKARP32238 428 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 IL6STP40189 918 aaPredicted RBP2.65□□□□□ -1.99
CHD9-204ENST00000561869 THBS3P49746 956 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 SHC2P98077 582 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 PICALMQ13492 652 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 CBFBQ13951 182 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 INPP5JQ15735 1006 aaPredicted RBP2.65□□□□□ -1.99
CHD9-204ENST00000561869 LIPMQ5VYY2 423 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 NUGGCQ68CJ6 796 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 WDR93Q6P2C0 686 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 SRLQ86TD4 932 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 ADGRF4Q8IZF3 695 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 OR1N1Q8NGS0 311 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 KAT2BQ92831 832 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 PMM1Q92871 262 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 ATP2A3Q93084 1043 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 SLC25A28Q96A46 364 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 FAR2Q96K12 515 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 MARK4Q96L34 752 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 WDR83Q9BRX9 315 aaKnown RBP2.65□□□□□ -1.99
CHD9-204ENST00000561869 MECRQ9BV79 373 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 TRIM2Q9C040 744 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 TP63Q9H3D4 680 aaPredicted RBP2.65□□□□□ -1.99
CHD9-204ENST00000561869 TXNRD2Q9NNW7 524 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 SPAG4Q9NPE6 437 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 UTS2RQ9UKP6 389 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 ZBTB1Q9Y2K1 713 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 CEP83Q9Y592 693 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 SQORQ9Y6N5 450 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 ZNF335Q9H4Z2 1342 aaPredicted RBP2.65□□□□□ -1.99
CHD9-204ENST00000561869 LMTK3Q96Q04 1460 aa2.65□□□□□ -1.99
CHD9-204ENST00000561869 FAM90A18PA6NE21 464 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 FAM90A16PA6NEW6 464 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 AQP12BA6NM10 295 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 A6NNC1 897 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 FAM90A9PA6NNJ1 464 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 FAM90A5PA8MXJ8 464 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 SMAD6O43541 496 aaKnown RBP2.64□□□□□ -1.99
CHD9-204ENST00000561869 DNPH1O43598 174 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 FAM90A15PP0C7V4 464 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 FAM90A14PP0C7W9 464 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 HOXB2P14652 356 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 TGM2P21980 687 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 SERPINB3P29508 390 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 PPM1AP35813 382 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 HTR6P50406 440 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 RHBDL3P58872 404 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 TAS2R50P59544 299 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 TLE3Q04726 772 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 TRIM60Q495X7 471 aa2.64□□□□□ -1.99
CHD9-204ENST00000561869 CRELD2Q6UXH1 353 aaPredicted RBP2.64□□□□□ -1.99
CHD9-204ENST00000561869 RFX8Q6ZV50 586 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms