RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 FIBINQ8TAL6 211 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 RLN3Q8WXF3 142 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 NT5C3BQ969T7 300 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 PCMTD1Q96MG8 357 aaPredicted RBP16.04■□□□□ 0.16
CCDC113-203ENST00000561517 NPY6RQ99463 290 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 CIPCQ9C0C6 399 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 ARRDC1-AS1Q9H2J1 176 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 SLC12A6Q9UHW9 1150 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 RAD54BQ9Y620 910 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 NUMA1Q14980 2115 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 CACNA1AO00555 2505 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 SPTBN2O15020 2390 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 TYW5A2RUC4 315 aaKnown RBP16.03■□□□□ 0.16
CCDC113-203ENST00000561517 NDUFV2P19404 249 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 ABCB4P21439 1286 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 CCR1P32246 355 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 LMNB2Q03252 620 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 MTA1Q13330 715 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 IQCB1Q15051 598 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 PLA2G2CQ5R387 149 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 OTUD1Q5VV17 481 aaPredicted RBP16.03■□□□□ 0.16
CCDC113-203ENST00000561517 NAA35Q5VZE5 725 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 MFN1Q8IWA4 741 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 LGI2Q8N0V4 545 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 AHI1Q8N157 1196 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 MSANTD4Q8NCY6 345 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 CPA5Q8WXQ8 436 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 SORCS1Q8WY21 1168 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 PGAP3Q96FM1 320 aaPredicted RBP16.03■□□□□ 0.16
CCDC113-203ENST00000561517 SPACA7Q96KW9 195 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 PRMT1Q99873 361 aaKnown RBP16.03■□□□□ 0.16
CCDC113-203ENST00000561517 ADAM33Q9BZ11 813 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
CCDC113-203ENST00000561517 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCDC113-203ENST00000561517 CALCOCO1Q9P1Z2 691 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 STIM2Q9P246 746 aa16.03■□□□□ 0.16
CCDC113-203ENST00000561517 MBD1Q9UIS9 605 aaPredicted RBP16.03■□□□□ 0.16
CCDC113-203ENST00000561517 CACNA1EQ15878 2313 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 SYNJ2BP-COX16A0A087WUM0 186 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 BCLAF3A2AJT9 711 aaKnown RBP16.02■□□□□ 0.16
CCDC113-203ENST00000561517 PRR5-ARHGAP8B1AHC4 643 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 ZBTB24O43167 697 aaPredicted RBP16.02■□□□□ 0.16
CCDC113-203ENST00000561517 TEX33O43247 280 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 FOXD2O60548 495 aaPredicted RBP16.02■□□□□ 0.16
CCDC113-203ENST00000561517 ZNF806P0C7X5 589 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 CD70P32970 193 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 ID4P47928 161 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 ARHGAP8P85298 464 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 STARD3Q14849 445 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 FUT11Q495W5 492 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 FAM102AQ5T9C2 384 aaPredicted RBP16.02■□□□□ 0.16
CCDC113-203ENST00000561517 RAP1GAP2Q684P5 730 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 MBLAC2Q68D91 279 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 TRIM72Q6ZMU5 477 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 PRR23CQ6ZRP0 262 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 ARCQ7LC44 396 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 CHSY1Q86X52 802 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 FRMD1Q8N878 549 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 RMDN1Q96DB5 314 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 MRGPRX1Q96LB2 322 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 TMEM245Q9H330 911 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 TMEM51Q9NW97 253 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 COX16Q9P0S2 106 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 TMEM59LQ9UK28 342 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 STAP1Q9ULZ2 295 aa16.02■□□□□ 0.16
CCDC113-203ENST00000561517 F5H5T6 163 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 M0QYT0 321 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 ZNF217O75362 1048 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 LUC7L3O95232 432 aaKnown RBP16.01■□□□□ 0.15
CCDC113-203ENST00000561517 ATP5BP06576 529 aaKnown RBP16.01■□□□□ 0.15
CCDC113-203ENST00000561517 DLDP09622 509 aaKnown RBP16.01■□□□□ 0.15
CCDC113-203ENST00000561517 TFE3P19532 575 aaPredicted RBP16.01■□□□□ 0.15
CCDC113-203ENST00000561517 PTMSP20962 102 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 MMP8P22894 467 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 PRKCHP24723 683 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 MPLP40238 635 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 CXCR3P49682 368 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 RNASE9P60153 205 aaKnown RBP16.01■□□□□ 0.15
CCDC113-203ENST00000561517 ARID5AQ03989 594 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 LMAN2Q12907 356 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 NME3Q13232 169 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 PTPRNQ16849 979 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 C2CD6Q53TS8 623 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 SPDYCQ5MJ68 293 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 METTL3Q86U44 580 aaKnown RBP16.01■□□□□ 0.15
CCDC113-203ENST00000561517 CFAP52Q8N1V2 620 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 CARNMT1Q8N4J0 409 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 RNF34Q969K3 372 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 TTC17Q96AE7 1141 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 PIGVQ9NUD9 493 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 DLL3Q9NYJ7 618 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 INTS6Q9UL03 887 aaKnown RBP16.01■□□□□ 0.15
CCDC113-203ENST00000561517 PLA2G4CQ9UP65 541 aa16.01■□□□□ 0.15
CCDC113-203ENST00000561517 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.01■□□□□ 0.15
CCDC113-203ENST00000561517 NYNRINQ9P2P1 1898 aaKnown RBP16■□□□□ 0.15
CCDC113-203ENST00000561517 IGHV1OR15-9A0A0B4J2B8 117 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 SYCE3A1L190 88 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 SYNCRIPO60506 623 aaKnown RBP16■□□□□ 0.15
CCDC113-203ENST00000561517 F9P00740 461 aa16■□□□□ 0.15
CCDC113-203ENST00000561517 C7P10643 843 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms