RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 MMP17Q9ULZ9 603 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 LUC7L2Q9Y383 392 aaKnown RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 PCDHGA2Q9Y5H1 932 aa10.48□□□□□ -0.73
HERC1-212ENST00000561348 MYO18AQ92614 2054 aaKnown RBP10.48□□□□□ -0.73
HERC1-212ENST00000561348 CACNA1HO95180 2353 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 DCLK1O15075 740 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 MAP3K13O43283 966 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 SYNCRIPO60506 623 aaKnown RBP10.47□□□□□ -0.73
HERC1-212ENST00000561348 LATS1O95835 1130 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 F9P00740 461 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 LMNAP02545 664 aaKnown RBP10.47□□□□□ -0.73
HERC1-212ENST00000561348 TPM1P09493 284 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 PABPC1P11940 636 aaKnown RBP10.47□□□□□ -0.73
HERC1-212ENST00000561348 HLA-EP13747 358 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 POLR2EP19388 210 aaKnown RBP10.47□□□□□ -0.73
HERC1-212ENST00000561348 HLA-FP30511 346 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 CD70P32970 193 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 NBL1P41271 181 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 KIR2DL1P43626 348 aaPredicted RBP10.47□□□□□ -0.73
HERC1-212ENST00000561348 ZNF445P59923 1031 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 CENPCQ03188 943 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 NNTQ13423 1086 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 CRY1Q16526 586 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 TSR1Q2NL82 804 aaKnown RBP10.47□□□□□ -0.73
HERC1-212ENST00000561348 SLC25A52Q3SY17 297 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 RAB6CQ53S08 254 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 RABGAP1LQ5R372 815 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 SH3PXD2AQ5TCZ1 1133 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 ACAD10Q6JQN1 1059 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 KIAA1324Q6UXG2 1013 aaKnown RBP10.47□□□□□ -0.73
HERC1-212ENST00000561348 SERPINA13PQ6UXR4 307 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 BEND5Q7L4P6 421 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 ASCL5Q7RTU5 278 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 ZNF571Q7Z3V5 609 aaPredicted RBP10.47□□□□□ -0.73
HERC1-212ENST00000561348 VPS36Q86VN1 386 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 WFDC5Q8TCV5 224 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 PRICKLE1Q96MT3 831 aaPredicted RBP10.47□□□□□ -0.73
HERC1-212ENST00000561348 MCEEQ96PE7 176 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 NPY6RQ99463 290 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 RAB6CQ9H0N0 254 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 ELOVL2Q9NXB9 296 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 RRN3Q9NYV6 651 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 CALCOCO1Q9P1Z2 691 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 GGA2Q9UJY4 613 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 MYO6Q9UM54 1294 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 PLA2G4CQ9UP65 541 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 PAXBP1Q9Y5B6 917 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.47□□□□□ -0.73
HERC1-212ENST00000561348 HS3ST4Q9Y661 456 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 KIAA1549LQ6ZVL6 1849 aa10.47□□□□□ -0.73
HERC1-212ENST00000561348 HRO43593 1189 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 ADAM23O75077 832 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 RPP40O75818 363 aaKnown RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 MOCS3O95396 460 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 IGLV3-25P01717 112 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 FTLP02792 175 aaPredicted RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 EPHX1P07099 455 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 PLEKP08567 350 aaPredicted RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 HNRNPLP14866 589 aaKnown RBP eCLIP10.46□□□□□ -0.73
HERC1-212ENST00000561348 DESP17661 470 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 GPD1P21695 349 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 RRM1P23921 792 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 RDXP35241 583 aaKnown RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 RFC1P35251 1148 aaPredicted RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 ZBED6P86452 979 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 LMAN2Q12907 356 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 AUHQ13825 339 aaKnown RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 STARD3Q14849 445 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 FSCBQ5H9T9 825 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 RNF219Q5W0B1 726 aaPredicted RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 MBLAC2Q68D91 279 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 SMYD5Q6GMV2 418 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 TRNP1Q6NT89 227 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 RWDD4Q6NW29 188 aaKnown RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 FBXL22Q6P050 247 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 WDR59Q6PJI9 974 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 LRRC31Q6UY01 552 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 TFAP2DQ7Z6R9 452 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 C14orf80Q86SX3 495 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 PHF13Q86YI8 300 aaPredicted RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 FAM217AQ8IXS0 508 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 MCOLN2Q8IZK6 566 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 CAMKK1Q8N5S9 505 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 DEFB119Q8N690 84 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 FAM172AQ8WUF8 416 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 RLN3Q8WXF3 142 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 AZIN2Q96A70 460 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 ZNF653Q96CK0 615 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 FAM126AQ9BYI3 521 aaPredicted RBP10.46□□□□□ -0.73
HERC1-212ENST00000561348 SLC2A11Q9BYW1 496 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 ADAM33Q9BZ11 813 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 EDEM3Q9BZQ6 932 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 SLC6A17Q9H1V8 727 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 DEF6Q9H4E7 631 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 AIPL1Q9NZN9 384 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 ADAMTS1Q9UHI8 967 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 STOML2Q9UJZ1 356 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 TMEM59LQ9UK28 342 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 SMG5Q9UPR3 1016 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms