RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 MTF2Q9Y483 593 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 HS3ST4Q9Y661 456 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 EPN1Q9Y6I3 576 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 PLXND1Q9Y4D7 1925 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 IGLV3-10A0A075B6K4 115 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 SYNJ2BP-COX16A0A087WUM0 186 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 DRGXA6NNA5 263 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 NEDD8-MDP1E9PL57 170 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 F5H5T6 163 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 RNF8O76064 485 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 NDUFA10O95299 355 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 PCK1P35558 622 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 PLA2G5P39877 138 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 GRIA2P42262 883 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 TNFRSF4P43489 277 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 ATXN1P54253 815 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 VCPP55072 806 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 HADHBP55084 474 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 GRSF1Q12849 480 aaKnown RBP eCLIP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 AUHQ13825 339 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 CDO1Q16878 200 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 ARL13BQ3SXY8 428 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 RAB6CQ53S08 254 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 RFWD3Q6PCD5 774 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 NUDT18Q6ZVK8 323 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 C12orf40Q86WS4 652 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 FAM131BQ86XD5 332 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 PSTKQ8IV42 348 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 RHOT2Q8IXI1 618 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 ARFGAP1Q8N6T3 406 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 TERB1Q8NA31 727 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 SPC24Q8NBT2 197 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 HJURPQ8NCD3 748 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 FLCNQ8NFG4 579 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 CCDC26Q8TAB7 109 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 FIBINQ8TAL6 211 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 KCNV2Q8TDN2 545 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 DDI1Q8WTU0 396 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 EZH1Q92800 747 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 PRICKLE1Q96MT3 831 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 BAG1Q99933 345 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 LRFN3Q9BTN0 628 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 NUP85Q9BW27 656 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 PACSIN1Q9BY11 444 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 FOXQ1Q9C009 403 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 RAB6CQ9H0N0 254 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 COX16Q9P0S2 106 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 MYO1AQ9UBC5 1043 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 PPARGC1AQ9UBK2 798 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 IP6K2Q9UHH9 426 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 STARD13Q9Y3M8 1113 aa9.96□□□□□ -0.82
RABGGTA-221ENST00000561055 CEP192Q8TEP8 1941 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 A0A0A6YYK5 440 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 FAM86C2PA6NEL3 165 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 SOWAHDA6NJG2 315 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 CHURC1-FNTBB4DL54 471 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 K7EQS6 105 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 MYO1FO00160 1098 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 PI15O43692 258 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 LRCH4O75427 683 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 KAT7O95251 611 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 MOCS2O96007 188 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 APODP05090 189 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 PSMA2P25787 234 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 AVPR2P30518 371 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 L1CAMP32004 1257 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 ARHGAP25P42331 645 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 MAGEA1P43355 309 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 DGKGP49619 791 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 SGSHP51688 502 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 PLK1P53350 603 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 RPS24P62847 133 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 MRPS21P82921 87 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 MESP2Q0VG99 397 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 LRRC32Q14392 662 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 UBXN2BQ14CS0 331 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 HSF5Q4G112 596 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 MANEALQ5VSG8 457 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 RAP1GAP2Q684P5 730 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 NAIF1Q69YI7 327 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 GRAMD4Q6IC98 578 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 FBXL22Q6P050 247 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 RAD9BQ6WBX8 426 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 CYP4V2Q6ZWL3 525 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 SLFN11Q7Z7L1 901 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 CHSY1Q86X52 802 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 LGI2Q8N0V4 545 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 NAT16Q8N8M0 369 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 TMEM105Q8N8V8 129 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 SLC35G2Q8TBE7 412 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 ZNF564Q8TBZ8 553 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 RFFLQ8WZ73 363 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 MYEOVQ96EZ4 313 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 LMLNQ96KR4 655 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 CHRDQ9H2X0 955 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 LMAN1LQ9HAT1 526 aa9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 LUC7LQ9NQ29 371 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-221ENST00000561055 ARHGEF4Q9NR80 690 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms