RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 POLR2EP19388 210 aaKnown RBP16.84■□□□□ 0.29
SNX1-213ENST00000561026 SPINK2P20155 84 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 SIM1P81133 766 aaPredicted RBP16.84■□□□□ 0.29
SNX1-213ENST00000561026 MEA1Q16626 185 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 DCAF12L1Q5VU92 463 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 ENOSF1Q7L5Y1 443 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 ZNF366Q8N895 744 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 ZNF557Q8N988 423 aaPredicted RBP16.84■□□□□ 0.29
SNX1-213ENST00000561026 HJURPQ8NCD3 748 aaPredicted RBP16.84■□□□□ 0.29
SNX1-213ENST00000561026 FIBINQ8TAL6 211 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 ZNF606Q8WXB4 792 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 SLC39A13Q96H72 371 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 LMLNQ96KR4 655 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 SLC4A5Q9BY07 1137 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 MIR1-1HGQ9H1L0 117 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 PCED1AQ9H1Q7 454 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 FBRSQ9HAH7 460 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 PRSS16Q9NQE7 514 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 STIM2Q9P246 746 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 KIAA1468Q9P260 1216 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 LETM1O95202 739 aaPredicted RBP16.83■□□□□ 0.28
SNX1-213ENST00000561026 PROS1P07225 676 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 RPS24P62847 133 aaKnown RBP16.83■□□□□ 0.28
SNX1-213ENST00000561026 GRIK2Q13002 908 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 SYPL2Q5VXT5 272 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 TMEM110Q86TL2 294 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 FAM124AQ86V42 546 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 MFN1Q8IWA4 741 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 ZCCHC9Q8N567 271 aaKnown RBP16.83■□□□□ 0.28
SNX1-213ENST00000561026 ADAM32Q8TC27 787 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 MYEOVQ96EZ4 313 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 PRICKLE1Q96MT3 831 aaPredicted RBP16.83■□□□□ 0.28
SNX1-213ENST00000561026 CRACR2AQ9BSW2 395 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 TRIM62Q9BVG3 475 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 SCNM1Q9BWG6 230 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 LHX5Q9H2C1 402 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 CYTH4Q9UIA0 394 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 RWDD2AQ9UIY3 292 aa16.83■□□□□ 0.28
SNX1-213ENST00000561026 SPEGQ15772 3267 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 C1QTNF9BB2RNN3 333 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 BCAT2O15382 392 aaPredicted RBP16.82■□□□□ 0.28
SNX1-213ENST00000561026 PAPSS1O43252 624 aaPredicted RBP16.82■□□□□ 0.28
SNX1-213ENST00000561026 C1QTNF9P0C862 333 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 RPS14P62263 151 aaKnown RBP16.82■□□□□ 0.28
SNX1-213ENST00000561026 FAM193AP78312 1265 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 ZBTB16Q05516 673 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 HNRNPDQ14103 355 aaKnown RBP16.82■□□□□ 0.28
SNX1-213ENST00000561026 MS4A13Q5J8X5 152 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 TRIM65Q6PJ69 517 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 UNQ6494/PRO21346Q6UXR6 183 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 TAC4Q86UU9 113 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 C1orf216Q8TAB5 229 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 TTC17Q96AE7 1141 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 FAM81BQ96LP2 452 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 MED15Q96RN5 788 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 ADAM33Q9BZ11 813 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 NUCKS1Q9H1E3 243 aaKnown RBP16.82■□□□□ 0.28
SNX1-213ENST00000561026 ACP6Q9NPH0 428 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 SUN2Q9UH99 717 aa16.82■□□□□ 0.28
SNX1-213ENST00000561026 EIF2B4Q9UI10 523 aaKnown RBP16.82■□□□□ 0.28
SNX1-213ENST00000561026 TYW5A2RUC4 315 aaKnown RBP16.81■□□□□ 0.28
SNX1-213ENST00000561026 E5RJQ4 531 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 CAPN9O14815 690 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 THAP12O43422 761 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 SH3BP5O60239 455 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 GNA15P30679 374 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 ACSL1P33121 698 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 YWHAZP63104 245 aaKnown RBP16.81■□□□□ 0.28
SNX1-213ENST00000561026 CAMK4Q16566 473 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 GJB7Q6PEY0 223 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 CREBRFQ8IUR6 639 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 TMEM121BQ9BXQ6 578 aaPredicted RBP16.81■□□□□ 0.28
SNX1-213ENST00000561026 THAP9Q9H5L6 903 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 POPDC2Q9HBU9 364 aa16.81■□□□□ 0.28
SNX1-213ENST00000561026 XPO7Q9UIA9 1087 aaKnown RBP16.81■□□□□ 0.28
SNX1-213ENST00000561026 INTS6Q9UL03 887 aaKnown RBP16.81■□□□□ 0.28
SNX1-213ENST00000561026 BECN2A8MW95 431 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 HYAL3O43820 417 aaPredicted RBP16.8■□□□□ 0.28
SNX1-213ENST00000561026 MOCS2O96007 188 aaPredicted RBP16.8■□□□□ 0.28
SNX1-213ENST00000561026 DNTTP04053 509 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 SLC9A1P19634 815 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 CSKP41240 450 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 UBE2HP62256 183 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 CDH18Q13634 790 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 DCAF6Q58WW2 860 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 ZC3H12AQ5D1E8 599 aaKnown RBP16.8■□□□□ 0.28
SNX1-213ENST00000561026 FSCBQ5H9T9 825 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 IRF2BP1Q8IU81 584 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 CCDC117Q8IWD4 279 aaPredicted RBP16.8■□□□□ 0.28
SNX1-213ENST00000561026 CFAP52Q8N1V2 620 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 CARNMT1Q8N4J0 409 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 MYO19Q96H55 970 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 CAMK1GQ96NX5 476 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 BTBD1Q9H0C5 482 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 C6orf106Q9H6K1 298 aaPredicted RBP16.8■□□□□ 0.28
SNX1-213ENST00000561026 IGF2RP11717 2491 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 MUC22E2RYF6 1773 aaPredicted RBP16.8■□□□□ 0.28
SNX1-213ENST00000561026 KNL1Q8NG31 2342 aa16.8■□□□□ 0.28
SNX1-213ENST00000561026 WDFY3Q8IZQ1 3526 aa16.79■□□□□ 0.28
SNX1-213ENST00000561026 LUC7L3O95232 432 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms