RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ANKLE1Q8NAG6 615 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 PPFIBP2Q8ND30 876 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 GFM2Q969S9 779 aaKnown RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 MARVELD3Q96A59 401 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 OTUD5Q96G74 571 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 CGREF1Q99674 301 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF184Q99676 751 aaPredicted RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 DDX50Q9BQ39 737 aaKnown RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 DBNDD2Q9BQY9 259 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 STK33Q9BYT3 514 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 EPB41L1Q9H4G0 881 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 SMURF1Q9HCE7 757 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 TIMMDC1Q9NPL8 285 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 NDUFA13Q9P0J0 144 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF624Q9P2J8 865 aaPredicted RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ITM2BQ9Y287 266 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 HEY1Q9Y5J3 304 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 FADS3Q9Y5Q0 445 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 SPATA31A6Q5VVP1 1343 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 RREB1Q92766 1687 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 ERVV-1B6SEH8 477 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 PTGES3LE9PB15 166 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 SOX1O00570 391 aaPredicted RBP6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 MAGEB3O15480 346 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 PJA2O43164 708 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 SERPINB7O75635 380 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 NUDT17P0C025 328 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 ITGA4P13612 1032 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 CPA3P15088 417 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 TXKP42681 527 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 KCNC1P48547 511 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 IFNAR2P48551 515 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 ACADVLP49748 655 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 GALK1P51570 392 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 PMS2P54278 862 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 CAMK2DQ13557 499 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 ACVR2BQ13705 512 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 CNGA2Q16280 664 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 CCDC153Q494R4 210 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF805Q5CZA5 627 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 MBLAC2Q68D91 279 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 GDF6Q6KF10 455 aaPredicted RBP6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 LRRC74BQ6ZQY2 392 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 USP49Q70CQ1 688 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 PIWIL3Q7Z3Z3 882 aaKnown RBP6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 KLHL7Q8IXQ5 586 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 USP38Q8NB14 1042 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 PCSK9Q8NBP7 692 aaKnown RBP6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 FNDC8Q8TC99 324 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 ATP6V0A1Q93050 837 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 PAGE5Q96GU1 130 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 VRK1Q99986 396 aaPredicted RBP6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 DSCC1Q9BVC3 393 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 CYP4F11Q9HBI6 524 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 EXOC1Q9NV70 894 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 GFOD1Q9NXC2 390 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 CLEC1BQ9P126 229 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 KLHL14Q9P2G3 628 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 SEC63Q9UGP8 760 aaKnown RBP6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 KCNH4Q9UQ05 1017 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 NAALADL1Q9UQQ1 740 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 FAM32AQ9Y421 112 aaKnown RBP6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 TIMM22Q9Y584 194 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 PALLDQ8WX93 1383 aa6.96□□□□□ -1.29
TSPAN3-209ENST00000560715 PDS5AQ29RF7 1337 aaKnown RBP6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 MYH7BA7E2Y1 1941 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 CCDC162PA2VCL2 907 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 CCDC169A6NNP5 214 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 TCP11X1B4DZS4 312 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 RNF223E7ERA6 249 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 UBE2CO00762 179 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 STRNO43815 780 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 AGTP01019 485 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 GSTT2P0CG29 244 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 GSTT2BP0CG30 244 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNF865P0CJ78 1059 aaPredicted RBP6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 CSH1P0DML2 217 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 CSH2P0DML3 217 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 CDK4P11802 303 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 KRT13P13646 458 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 MAOBP27338 520 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 SLC34A1Q06495 639 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 TRIM25Q14258 630 aaKnown RBP6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 LASP1Q14847 261 aaKnown RBP6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 TMEM132BQ14DG7 1078 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 WDR72Q3MJ13 1102 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 PAN2Q504Q3 1202 aaKnown RBP6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 ZCWPW2Q504Y3 356 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 WDR73Q6P4I2 378 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 UNC13DQ70J99 1090 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 MCATQ8IVS2 390 aaKnown RBP6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 SYT2Q8N9I0 419 aaPredicted RBP6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 FNIP1Q8TF40 1166 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 TSPEARQ8WU66 669 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 GAB3Q8WWW8 586 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 CNDP1Q96KN2 507 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 ABHD1Q96SE0 405 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 TBC1D10AQ9BXI6 508 aa6.96□□□□□ -1.3
TSPAN3-209ENST00000560715 KLF18A0A0U1RQI7 1052 aa6.95□□□□□ -1.3
TSPAN3-209ENST00000560715 SCDO00767 359 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms