RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 AJAP1Q9UKB5 411 aaPredicted RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 STX8Q9UNK0 236 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 STXBP5LQ9Y2K9 1186 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 GPR52Q9Y2T5 361 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 ACTL7AQ9Y615 435 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 DDX60LQ5H9U9 1706 aaKnown RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 VWA3AA6NCI4 1184 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 TMEM200CA6NKL6 621 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 PP2D1A8MPX8 630 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 BECN2A8MW95 431 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 TMEM232C9JQI7 657 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 GOLGA6L19H0YKK7 550 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 PJA2O43164 708 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 SNX2O60749 519 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 RECQL4O94761 1208 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 ABHD16AO95870 558 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 PARP1P09874 1014 aaKnown RBP4.78□□□□□ -1.64
TMOD3-207ENST00000560549 SNHG28P0DPA3 235 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 PDHBP11177 359 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 VDRP11473 427 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 XBP1P17861 261 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 SLC6A2P23975 617 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 CDC25AP30304 524 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 GRK6P43250 576 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 GNAQP50148 359 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 CLRN1P58418 232 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 RAP2BP61225 183 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 RAB1AP62820 205 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 TCP10Q12799 353 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 SP140Q13342 867 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 SEMA5AQ13591 1074 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 POSTNQ15063 836 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 ATXN7L2Q5T6C5 722 aaPredicted RBP4.78□□□□□ -1.64
TMOD3-207ENST00000560549 EFCAB12Q6NXP0 572 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 PDZD4Q76G19 769 aaPredicted RBP4.78□□□□□ -1.64
TMOD3-207ENST00000560549 SDR16C5Q8N3Y7 309 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 CELF5Q8N6W0 485 aaKnown RBP4.78□□□□□ -1.64
TMOD3-207ENST00000560549 SPATA20Q8TB22 786 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 TEKT1Q969V4 418 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 MYEOVQ96EZ4 313 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 CLPTM1LQ96KA5 538 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 UHRF1Q96T88 793 aaPredicted RBP4.78□□□□□ -1.64
TMOD3-207ENST00000560549 VRK1Q99986 396 aaPredicted RBP4.78□□□□□ -1.64
TMOD3-207ENST00000560549 CRB3Q9BUF7 120 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 MRI1Q9BV20 369 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 SPZ1Q9BXG8 430 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 XPO4Q9C0E2 1151 aaKnown RBP4.78□□□□□ -1.64
TMOD3-207ENST00000560549 RIOX1Q9H6W3 641 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 AGO4Q9HCK5 861 aaKnown RBP4.78□□□□□ -1.64
TMOD3-207ENST00000560549 INTS13Q9NVM9 706 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 FBXO34Q9NWN3 711 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 ANKFY1Q9P2R3 1169 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 GJD2Q9UKL4 321 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 SLC45A1Q9Y2W3 748 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 USP15Q9Y4E8 981 aaPredicted RBP4.78□□□□□ -1.64
TMOD3-207ENST00000560549 PCDHGB6Q9Y5F9 930 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 PLIN4Q96Q06 1357 aa4.78□□□□□ -1.64
TMOD3-207ENST00000560549 MYH2Q9UKX2 1941 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 DICER1Q9UPY3 1922 aaKnown RBP4.77□□□□□ -1.65
TMOD3-207ENST00000560549 LAMB1P07942 1786 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 A0A088AWK7 358 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 SMCO2A6NFE2 343 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 UNC119BA6NIH7 251 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 J3KRW8 73 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 IKBKBO14920 756 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 RAP2AP10114 183 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 LAG3P18627 525 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 CALML3P27482 149 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 SLC16A2P36021 539 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 NT5C2P49902 561 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 FKBP1AP62942 108 aaKnown RBP4.77□□□□□ -1.65
TMOD3-207ENST00000560549 CCZ1BP86790 482 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 CCZ1P86791 482 aaPredicted RBP4.77□□□□□ -1.65
TMOD3-207ENST00000560549 BTKQ06187 659 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 GOLGA8FQ08AF8 430 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 ZNF543Q08ER8 600 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 GOLGA8DPQ0D2H9 430 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 SNAPC2Q13487 334 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 TRIM14Q14142 442 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 PDCD2Q16342 344 aaPredicted RBP4.77□□□□□ -1.65
TMOD3-207ENST00000560549 KHDC1Q4VXA5 237 aaKnown RBP4.77□□□□□ -1.65
TMOD3-207ENST00000560549 PRR16Q569H4 304 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 HSP90AA4PQ58FG1 418 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 STRIP1Q5VSL9 837 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 AGAP9Q5VTM2 703 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 MZT2BQ6NZ67 158 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 ARMCX5Q6P1M9 558 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 TLDC1Q6P9B6 456 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 KCNV1Q6PIU1 500 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 C1orf122Q6ZSJ8 110 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 MAATS1Q7Z4T9 603 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 TTC7BQ86TV6 843 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 GPR150Q8NGU9 434 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 CDK5RAP3Q96JB5 506 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 PRMT6Q96LA8 375 aaPredicted RBP4.77□□□□□ -1.65
TMOD3-207ENST00000560549 PPM1MQ96MI6 270 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 DCLRE1CQ96SD1 692 aaKnown RBP4.77□□□□□ -1.65
TMOD3-207ENST00000560549 LZTS2Q9BRK4 669 aa4.77□□□□□ -1.65
TMOD3-207ENST00000560549 ZMYND12Q9H0C1 365 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms