RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 GOLGA1Q92805 767 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 CCDC47Q96A33 483 aaKnown RBP10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 SLC6A18Q96N87 628 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 ULBP1Q9BZM6 244 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 FBRSQ9HAH7 460 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 LRRC4Q9HBW1 653 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 SGK2Q9HBY8 427 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 APOBEC3GQ9HC16 384 aaKnown RBP10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 DMAC2Q9NW81 257 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 FBXL12Q9NXK8 326 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 STIM2Q9P246 746 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 SUN2Q9UH99 717 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 SFMBT1Q9UHJ3 866 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 SERTAD1Q9UHV2 236 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 CEP83Q9Y592 693 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 USP3Q9Y6I4 520 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 COL5A1P20908 1838 aaPredicted RBP10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 TYW5A2RUC4 315 aaKnown RBP10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 E9PAM4 449 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 PDXKO00764 312 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 TBL1XO60907 577 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 DKK1O94907 266 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 ZBED1O96006 694 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 NR2F2P24468 414 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 CTSKP43235 329 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 ZBTB16Q05516 673 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 SFSWAPQ12872 951 aaKnown RBP10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 GOLGA7BQ2TAP0 167 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 KCNT1Q5JUK3 1230 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 PPP1R15BQ5SWA1 713 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 INTS8Q75QN2 995 aaKnown RBP10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 CCDC117Q8IWD4 279 aaPredicted RBP10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 FAM186BQ8IYM0 893 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 SIX6OS1Q8N1H7 587 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 ZNF276Q8N554 614 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 EID2Q8N6I1 236 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 COL26A1Q96A83 441 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 FCRL3Q96P31 734 aaPredicted RBP10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 OMDQ99983 421 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 MTG2Q9H4K7 406 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 PRSS16Q9NQE7 514 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 HESX1Q9UBX0 185 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 ASXL3Q9C0F0 2248 aa10.93□□□□□ -0.66
CDC42BPB-207ENST00000560492 A0A1B0GTQ1 180 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 A0A1W2PP55 124 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 LRRC72A6NJI9 287 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 TK2O00142 265 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 CAPN9O14815 690 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 MSI1O43347 362 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 RNASEH2AO75792 299 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 HSP90AA1P07900 732 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 DLDP09622 509 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 CD19P15391 556 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 EIF2S3P41091 472 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 ZNF445P59923 1031 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 RACK1P63244 317 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 PPP3CAQ08209 521 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 ADIGQ0VDE8 80 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 TARDBPQ13148 414 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 SLC45A4Q5BKX6 768 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 HES3Q5TGS1 186 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 RFWD3Q6PCD5 774 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 NCEH1Q6PIU2 408 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 MFN1Q8IWA4 741 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 DHX40Q8IX18 779 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 TTC39CQ8N584 583 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 TMEM176AQ96HP8 235 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 INTS4Q96HW7 963 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 ELF4Q99607 663 aaPredicted RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 TMEM245Q9H330 911 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 KCTD10Q9H3F6 313 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 OSGEPQ9NPF4 335 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 GDF3Q9NR23 364 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 CISHQ9NSE2 258 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 PCDHA7Q9UN72 937 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 MAPK8IP1Q9UQF2 711 aa10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 HBS1LQ9Y450 684 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 SETXQ7Z333 2677 aaKnown RBP10.92□□□□□ -0.66
CDC42BPB-207ENST00000560492 A0A1W2PPC4 97 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 VILLO15195 856 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 KLRC4O43908 158 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 IGHV4-34P06331 123 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 SLFN14P0C7P3 912 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 LCP1P13796 627 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 CD38P28907 300 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 CD70P32970 193 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 PSMC2P35998 433 aaKnown RBP10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 PSMD8P48556 350 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 SLC11A2P49281 568 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 ARRB1P49407 418 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 SGSHP51688 502 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 CCDC173Q0VFZ6 552 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 TRIP4Q15650 581 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 C1orf220Q5T0J3 134 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 ADGRF1Q5T601 910 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 RNF219Q5W0B1 726 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 RESP18Q5W5W9 173 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 ZNF605Q86T29 641 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 ADIPOR2Q86V24 386 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms