RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 FAM131BQ86XD5 332 aa10□□□□□ -0.81
RTF1-206ENST00000560447 IGDCC3Q8IVU1 814 aa10□□□□□ -0.81
RTF1-206ENST00000560447 ZNF276Q8N554 614 aa10□□□□□ -0.81
RTF1-206ENST00000560447 CCDC110Q8TBZ0 833 aa10□□□□□ -0.81
RTF1-206ENST00000560447 INPP5DQ92835 1189 aa10□□□□□ -0.81
RTF1-206ENST00000560447 STAMBPL1Q96FJ0 436 aa10□□□□□ -0.81
RTF1-206ENST00000560447 HHIPL1Q96JK4 782 aa10□□□□□ -0.81
RTF1-206ENST00000560447 RAB3IPQ96QF0 476 aaPredicted RBP10□□□□□ -0.81
RTF1-206ENST00000560447 PAIP2Q9BPZ3 127 aaKnown RBP10□□□□□ -0.81
RTF1-206ENST00000560447 ULBP1Q9BZM6 244 aa10□□□□□ -0.81
RTF1-206ENST00000560447 IQCGQ9H095 443 aaKnown RBP10□□□□□ -0.81
RTF1-206ENST00000560447 GOLGA2P5Q9HBQ8 144 aa10□□□□□ -0.81
RTF1-206ENST00000560447 MLXIPLQ9NP71 852 aa10□□□□□ -0.81
RTF1-206ENST00000560447 CRTAC1Q9NQ79 661 aa10□□□□□ -0.81
RTF1-206ENST00000560447 KRT82Q9NSB4 513 aa10□□□□□ -0.81
RTF1-206ENST00000560447 ABCF3Q9NUQ8 709 aa10□□□□□ -0.81
RTF1-206ENST00000560447 MOCS1Q9NZB8 636 aa10□□□□□ -0.81
RTF1-206ENST00000560447 FBXW11Q9UKB1 542 aa10□□□□□ -0.81
RTF1-206ENST00000560447 FRMPD3Q5JV73 1810 aa10□□□□□ -0.81
RTF1-206ENST00000560447 A0A0U1RQF3 1178 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 ARL5CA6NH57 179 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 MFSD11O43934 449 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 UNC5CO95185 931 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 METTL18O95568 372 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 MLH1P40692 756 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 CXCR3P49682 368 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 PPIDQ08752 370 aaKnown RBP9.99□□□□□ -0.81
RTF1-206ENST00000560447 FAAP100Q0VG06 881 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 TUSC3Q13454 348 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 EFTUD2Q15029 972 aaKnown RBP eCLIP9.99□□□□□ -0.812e-7■■■■■ 41.6
RTF1-206ENST00000560447 ZKSCAN8Q15776 578 aaPredicted RBP9.99□□□□□ -0.81
RTF1-206ENST00000560447 SNCBQ16143 134 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 UPP1Q16831 310 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 INSCQ1MX18 579 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 SPANXN3Q5MJ09 141 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 BRMS1LQ5PSV4 323 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 SWT1Q5T5J6 900 aaKnown RBP9.99□□□□□ -0.81
RTF1-206ENST00000560447 FAM91A1Q658Y4 838 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 ITPRIPL1Q6GPH6 555 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 GDF6Q6KF10 455 aaPredicted RBP9.99□□□□□ -0.81
RTF1-206ENST00000560447 AGMOQ6ZNB7 445 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 RFX8Q6ZV50 586 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 ASRGL1Q7L266 308 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 SAPCD2Q86UD0 394 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 ECHDC2Q86YB7 292 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 PARP9Q8IXQ6 854 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 KLHDC8BQ8IXV7 354 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 THEM5Q8N1Q8 247 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 PPM1NQ8N819 430 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 COLGALT1Q8NBJ5 622 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 PCSK9Q8NBP7 692 aaKnown RBP9.99□□□□□ -0.81
RTF1-206ENST00000560447 SMC1BQ8NDV3 1235 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 TRPV1Q8NER1 839 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 CFAP61Q8NHU2 1237 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 C10orf82Q8WW14 230 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 LENG1Q96BZ8 264 aaPredicted RBP9.99□□□□□ -0.81
RTF1-206ENST00000560447 HDAC11Q96DB2 347 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 CFAP36Q96G28 342 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 TMEM237Q96Q45 408 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 GAD1Q99259 594 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 SMOQ99835 787 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 SIKE1Q9BRV8 207 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 TRIM55Q9BYV6 548 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 OSBPL2Q9H1P3 480 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 MANSC1Q9H8J5 431 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 KIF9Q9HAQ2 790 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 WDR6Q9NNW5 1121 aaKnown RBP9.99□□□□□ -0.81
RTF1-206ENST00000560447 ARHGEF3Q9NR81 526 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 FNIP2Q9P278 1114 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 ADAM28Q9UKQ2 775 aa9.99□□□□□ -0.81
RTF1-206ENST00000560447 ZNF638Q14966 1978 aaKnown RBP9.99□□□□□ -0.81
RTF1-206ENST00000560447 PLXNA3P51805 1871 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 MAGEB16A2A368 324 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 FOXO6A8MYZ6 492 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 TRIM49D1C9J1S8 452 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 HHLA1C9JL84 531 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 TMEM189-UBE2V1I3L0A0 370 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 RNF103O00237 685 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 TRAFD1O14545 582 aaPredicted RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 HCRTO43612 131 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 DNAJC6O75061 913 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 ADAMTS4O75173 837 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 ATP2C2O75185 946 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 WFS1O76024 890 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 CHRNA1P02708 482 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 FYNP06241 537 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 VAV1P15498 845 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 NQO1P15559 274 aaKnown RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 ADRA1DP25100 572 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 CRHR1P34998 444 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 GARSP41250 739 aaKnown RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 ATXN1P54253 815 aaKnown RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 MAP3K7CLP57077 242 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 TPI1P60174 286 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 ELF3P78545 371 aaPredicted RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 PPARDQ03181 441 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 GALNT2Q10471 571 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 IFRD2Q12894 506 aaPredicted RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 SPRED3Q2MJR0 410 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 FBXW10Q5XX13 1052 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms