RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 STAT6P42226 847 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 KRTAP10-3P60369 221 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 C3orf38Q5JPI3 329 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 CEP85LQ5SZL2 805 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 LAS2Q8IYD9 372 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 CADM3Q8N126 398 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 OR52L2PQ8NGH6 319 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 AIFM3Q96NN9 605 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 TAAR9Q96RI9 348 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 RETREG1Q9H6L5 497 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 DDX31Q9H8H2 851 aaKnown RBP3.18□□□□□ -1.9
SPG11-222ENST00000560435 TBC1D14Q9P2M4 693 aa3.18□□□□□ -1.9
SPG11-222ENST00000560435 PNMA8BQ9ULN7 279 aaPredicted RBP3.18□□□□□ -1.9
SPG11-222ENST00000560435 A0A1B0GVY2 172 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 CAPN8A6NHC0 703 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 ERI2A8K979 691 aaKnown RBP3.17□□□□□ -1.9
SPG11-222ENST00000560435 FOXO6A8MYZ6 492 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 CBFA2T3O75081 653 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 IGLV2-11P01706 119 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 ZKSCAN1P17029 563 aaPredicted RBP3.17□□□□□ -1.9
SPG11-222ENST00000560435 MMP8P22894 467 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 TAF6P49848 677 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 AGTR2P50052 363 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 NEK2P51955 445 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 GPR18Q14330 331 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 CNGA2Q16280 664 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 DNTTIP2Q5QJE6 756 aaKnown RBP3.17□□□□□ -1.9
SPG11-222ENST00000560435 OTUD1Q5VV17 481 aaPredicted RBP3.17□□□□□ -1.9
SPG11-222ENST00000560435 FAM90A2PQ658T7 463 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 H1FNTQ75WM6 255 aaPredicted RBP3.17□□□□□ -1.9
SPG11-222ENST00000560435 SPEM1Q8N4L4 309 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 RFLNBQ8N5W9 214 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 ZBTB34Q8NCN2 500 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 OR52N4Q8NGI2 321 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 GABPB2Q8TAK5 448 aaPredicted RBP3.17□□□□□ -1.9
SPG11-222ENST00000560435 SLC35G2Q8TBE7 412 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 IPCEF1Q8WWN9 437 aaPredicted RBP3.17□□□□□ -1.9
SPG11-222ENST00000560435 ADAMTS14Q8WXS8 1223 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 RTP4Q96DX8 246 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 WDR24Q96S15 920 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 COL20A1Q9P218 1284 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 SLC8A2Q9UPR5 921 aa3.17□□□□□ -1.9
SPG11-222ENST00000560435 LOC102724159A0A0B4J2E5 919 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 IL18RAPO95256 599 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 CT47B1P0C2W7 299 aaPredicted RBP3.16□□□□□ -1.9
SPG11-222ENST00000560435 DRD1P21728 446 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 RFX5P48382 616 aaPredicted RBP3.16□□□□□ -1.9
SPG11-222ENST00000560435 CARSP49589 748 aaKnown RBP3.16□□□□□ -1.9
SPG11-222ENST00000560435 TRAF2Q12933 501 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 TRAF1Q13077 416 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 PWP2Q15269 919 aaKnown RBP3.16□□□□□ -1.9
SPG11-222ENST00000560435 FNBP1LQ5T0N5 605 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 ADAM5Q6NVV9 412 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 C8orf82Q6P1X6 216 aaPredicted RBP3.16□□□□□ -1.9
SPG11-222ENST00000560435 ZNF449Q6P9G9 518 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 APOA5Q6Q788 366 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 MEX3BQ6ZN04 569 aaKnown RBP3.16□□□□□ -1.9
SPG11-222ENST00000560435 SLC16A12Q6ZSM3 486 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 OVCH2Q7RTZ1 564 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 CLIP4Q8N3C7 705 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 HOOK2Q96ED9 719 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 DUX5Q96PT3 197 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 NODALQ96S42 347 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 SLC25A32Q9H2D1 315 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 TCF7L2Q9NQB0 619 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 DDX56Q9NY93 547 aaKnown RBP3.16□□□□□ -1.9
SPG11-222ENST00000560435 ITGB1BP2Q9UKP3 347 aa3.16□□□□□ -1.9
SPG11-222ENST00000560435 SNRNP70P08621 437 aaKnown RBP3.15□□□□□ -1.91
SPG11-222ENST00000560435 RFPL3SP0C7P2 107 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 FMO1Q01740 532 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 BFSP2Q13515 415 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 ELF2Q15723 593 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 KIF19Q2TAC6 998 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 ACSM6Q6P461 480 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 DSTYKQ6XUX3 929 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 UNC13DQ70J99 1090 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 CYB5R4Q7L1T6 521 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 KDELC2Q7Z4H8 507 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 GLMPQ8WWB7 406 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 TMEM60Q9H2L4 133 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 AASDHPPTQ9NRN7 309 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 WDR81Q562E7 1941 aa3.15□□□□□ -1.91
SPG11-222ENST00000560435 BUB3O43684 328 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 F7P08709 466 aaPredicted RBP3.14□□□□□ -1.91
SPG11-222ENST00000560435 GM2AP17900 193 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 CNN3Q15417 329 aaKnown RBP3.14□□□□□ -1.91
SPG11-222ENST00000560435 BRDTQ58F21 947 aaPredicted RBP3.14□□□□□ -1.91
SPG11-222ENST00000560435 KIAA0319LQ8IZA0 1049 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 CLASRPQ8N2M8 674 aaKnown RBP3.14□□□□□ -1.91
SPG11-222ENST00000560435 PAQR4Q8N4S7 273 aaPredicted RBP3.14□□□□□ -1.91
SPG11-222ENST00000560435 OVCA2Q8WZ82 227 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 PMM1Q92871 262 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 GPR78Q96P69 363 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 RHOBTB2Q9BYZ6 727 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 MAGEH1Q9H213 219 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 CATSPERBQ9H7T0 1116 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 USP35Q9P2H5 1018 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 TPCN1Q9ULQ1 816 aa3.14□□□□□ -1.91
SPG11-222ENST00000560435 CFAP69A5D8W1 941 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms