RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SLC36A4Q6YBV0 504 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 KIAA0907Q7Z7F0 614 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 SYT12Q8IV01 421 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 CHPFQ8IZ52 775 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 DEFB106AQ8N104 65 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 NEK11Q8NG66 645 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 ADAM32Q8TC27 787 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 RLN3Q8WXF3 142 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 DDX50Q9BQ39 737 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 PDCL3Q9H2J4 239 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 NLRC4Q9NPP4 1024 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 MBD1Q9UIS9 605 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 MAP3K13O43283 966 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 AP5Z1O43299 807 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 TIMM44O43615 452 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 TSPAN3O60637 253 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 ZNF217O75362 1048 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 DAB1O75553 588 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 CYP1A1P04798 512 aaPredicted RBP15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 MMEP08473 750 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 CHRNB2P17787 502 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 PMLP29590 882 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 NOMO3P69849 1222 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 SHC2P98077 582 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 CDK17Q00537 523 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 LMAN2Q12907 356 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 E2F5Q15329 346 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 ZC3H12AQ5D1E8 599 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 ANKS1BQ7Z6G8 1248 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 PGBD3Q8N328 593 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 NT5C3BQ969T7 300 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 C18orf8Q96DM3 657 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 SPAG5Q96R06 1193 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 ACOX2Q99424 681 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 SYNCQ9H7C4 482 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 TMEM9BQ9NQ34 198 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 CALCOCO1Q9P1Z2 691 aa15.74■□□□□ 0.11
SNRPA1-210ENST00000560383 PI4KAP42356 2102 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 GOLGA6L7A0A1B0GV03 622 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 SYCE3A1L190 88 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 KCNU1A8MYU2 1149 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 ZBTB24O43167 697 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 KCNK5O95279 499 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 SLC2A3P11169 496 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 HLA-FP30511 346 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 NOS2P35228 1153 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 PTGER3P43115 390 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 SGSHP51688 502 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 FMO1Q01740 532 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 MS4A13Q5J8X5 152 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 LYSMD4Q5XG99 296 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 TMEM215Q68D42 235 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 RFWD3Q6PCD5 774 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 ARCQ7LC44 396 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 ERICH1Q86X53 443 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 XYLT1Q86Y38 959 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 TMEFF1Q8IYR6 380 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 ZNF557Q8N988 423 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 HJURPQ8NCD3 748 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 SLC20A1Q8WUM9 679 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 PIGKQ92643 395 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 BTN2A3PQ96KV6 586 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 PRICKLE1Q96MT3 831 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 ELOVL2Q9NXB9 296 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 RRN3Q9NYV6 651 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 THAP10Q9P2Z0 257 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 XPO7Q9UIA9 1087 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 ANGPTL2Q9UKU9 493 aa15.73■□□□□ 0.11
SNRPA1-210ENST00000560383 CKAP5Q14008 2032 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 C4orf47A7E2U8 309 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 PATE3B3GLJ2 98 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 CDX4O14627 284 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 TEX33O43247 280 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 GRAP2O75791 330 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 APOEP02649 317 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 NDUFV2P19404 249 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 CCR1P32246 355 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 MATKP42679 507 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 MTA1Q13330 715 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 N4BP2L1Q5TBK1 243 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 OTUD1Q5VV17 481 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 SLC23A3Q6PIS1 610 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 TRIM72Q6ZMU5 477 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 RABEPKQ7Z6M1 372 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 FRMD1Q8N878 549 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 MSANTD4Q8NCY6 345 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 WFIKKN2Q8TEU8 576 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 MYEOVQ96EZ4 313 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 PGAP3Q96FM1 320 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 LMLNQ96KR4 655 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 PCMTD1Q96MG8 357 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 NPY6RQ99463 290 aa15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 PRMT1Q99873 361 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 NUSAP1Q9BXS6 441 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 NUCKS1Q9H1E3 243 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-210ENST00000560383 FAM204AQ9H8W3 233 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms