RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CXCR3P49682 368 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 ZNF157P51786 506 aaPredicted RBP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 LBX1P52954 281 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 MAP3K7CLP57077 242 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 TPI1P60174 286 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 COG7P83436 770 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 PPIDQ08752 370 aaKnown RBP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 WASHC5Q12768 1159 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SREBF2Q12772 1141 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SF3A3Q12874 501 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 IFRD2Q12894 506 aaPredicted RBP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 GRIK3Q13003 919 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 DSC3Q14574 896 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 MAPRE1Q15691 268 aaKnown RBP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 INSCQ1MX18 579 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SPANXN3Q5MJ09 141 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 KIAA0319Q5VV43 1072 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 MFSD14CQ5VZR4 134 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 ITPRIPL1Q6GPH6 555 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 PM20D1Q6GTS8 502 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 RGMBQ6NW40 437 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 KYAT3Q6YP21 454 aaKnown RBP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 AGMOQ6ZNB7 445 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 CCDC91Q7Z6B0 441 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 METTL23Q86XA0 190 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 KLHDC8BQ8IXV7 354 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 ZMIZ2Q8NF64 920 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 CFAP61Q8NHU2 1237 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SLC7A14Q8TBB6 771 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SH3TC2Q8TF17 1288 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 DEPDC1BQ8WUY9 529 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 HDAC11Q96DB2 347 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 PGBD4Q96DM1 585 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 ERP27Q96DN0 273 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 OXNAD1Q96HP4 312 aaPredicted RBP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 ZFP42Q96MM3 310 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 C7orf26Q96N11 449 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 FAM111AQ96PZ2 611 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 KLF6Q99612 283 aaPredicted RBP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 EPAS1Q99814 870 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 ACBD6Q9BR61 282 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SIKE1Q9BRV8 207 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 PRDM12Q9H4Q4 367 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 TLE6Q9H808 572 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 NOD2Q9HC29 1040 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SMYD2Q9NRG4 433 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 PIGVQ9NUD9 493 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SIRPGQ9P1W8 387 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 TRHDEQ9UKU6 1024 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 MAD1L1Q9Y6D9 718 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 MIA3Q5JRA6 1907 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 NUP205Q92621 2012 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 DOCK4Q8N1I0 1966 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 ARL5CA6NH57 179 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 YJEFN3A6XGL0 299 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 CXorf49A8MYA2 514 aaPredicted RBP8.31□□□□□ -1.08
SMAD3-212ENST00000559937 E7ENQ6 273 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 I3L4J1 428 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 M0QZQ0 153 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 CREB3O43889 395 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 AOC2O75106 756 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 GLRA3O75311 464 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 AP2A1O95782 977 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 POLBP06746 335 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 NEFHP12036 1026 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 TYMPP19971 482 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 ACAT1P24752 427 aaKnown RBP8.31□□□□□ -1.08
SMAD3-212ENST00000559937 PSMB4P28070 264 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 CST5P28325 142 aaPredicted RBP8.31□□□□□ -1.08
SMAD3-212ENST00000559937 PTPN4P29074 926 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 GARSP41250 739 aaKnown RBP8.31□□□□□ -1.08
SMAD3-212ENST00000559937 NDUFV1P49821 464 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 CLCNKBP51801 687 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 ARFIP2P53365 341 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 KCNJ2P63252 427 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 PITX1P78337 314 aaPredicted RBP8.31□□□□□ -1.08
SMAD3-212ENST00000559937 GALNT2Q10471 571 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 AP1B1Q10567 949 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 MTM1Q13496 603 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 UPP1Q16831 310 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 PREPLQ4J6C6 727 aaPredicted RBP8.31□□□□□ -1.08
SMAD3-212ENST00000559937 FAM26DQ5JW98 314 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 GNASQ5JWF2 1037 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 BRMS1LQ5PSV4 323 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 WLSQ5T9L3 541 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 SYPL2Q5VXT5 272 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 ARMC3Q5W041 872 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 GDF6Q6KF10 455 aaPredicted RBP8.31□□□□□ -1.08
SMAD3-212ENST00000559937 FAM171BQ6P995 826 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 DCLRE1AQ6PJP8 1040 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 PACS1Q6VY07 963 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 DENND5BQ6ZUT9 1274 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 HFE2Q6ZVN8 426 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 BHLHA9Q7RTU4 235 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 ZNF567Q8N184 647 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 MPP5Q8N3R9 675 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 PDCD7Q8N8D1 485 aaKnown RBP8.31□□□□□ -1.08
SMAD3-212ENST00000559937 TRPV1Q8NER1 839 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 PPP1R13LQ8WUF5 828 aa8.31□□□□□ -1.08
SMAD3-212ENST00000559937 ARNTL2Q8WYA1 636 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms