RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 LIASO43766 372 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 SRGAP2BP0DMP2 458 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 PECAM1P16284 738 aaPredicted RBP12.58□□□□□ -0.4
HERC1-205ENST00000559886 ERCC2P18074 760 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 EPHB2P29323 1055 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 CORO1AP31146 461 aaKnown RBP12.58□□□□□ -0.4
HERC1-205ENST00000559886 SLC11A2P49281 568 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 OTUD4Q01804 1114 aaKnown RBP12.58□□□□□ -0.4
HERC1-205ENST00000559886 AUHQ13825 339 aaKnown RBP12.58□□□□□ -0.4
HERC1-205ENST00000559886 GLE1Q53GS7 698 aaKnown RBP12.58□□□□□ -0.4
HERC1-205ENST00000559886 GPR158Q5T848 1215 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 NCBP2-AS2Q69YL0 99 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 NADSYN1Q6IA69 706 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 CCDC137Q6PK04 289 aaKnown RBP12.58□□□□□ -0.4
HERC1-205ENST00000559886 C14orf80Q86SX3 495 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 SLC35B2Q8TB61 432 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 P3H4Q92791 437 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 FAM118BQ9BPY3 351 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 LRRC1Q9BTT6 524 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 STIM2Q9P246 746 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 AMACRQ9UHK6 382 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 ZMYM5Q9UJ78 669 aa12.58□□□□□ -0.4
HERC1-205ENST00000559886 LINC01565O15544 149 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 ACSL4O60488 711 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 NR2C2P49116 596 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 SNX1Q13596 522 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 NAA30Q147X3 362 aaPredicted RBP12.57□□□□□ -0.4
HERC1-205ENST00000559886 PAFAH1B3Q15102 231 aaKnown RBP12.57□□□□□ -0.4
HERC1-205ENST00000559886 C8orf74Q6P047 294 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 NPNTQ6UXI9 565 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 DENND1CQ8IV53 801 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 CCDC26Q8TAB7 109 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 NKD2Q969F2 451 aaPredicted RBP12.57□□□□□ -0.4
HERC1-205ENST00000559886 WBP2Q969T9 261 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 TBC1D31Q96DN5 1066 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 RUNDC3BQ96NL0 473 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 DNPEPQ9ULA0 475 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 SZT2Q5T011 3432 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 NUP210Q8TEM1 1887 aaPredicted RBP12.57□□□□□ -0.4
HERC1-205ENST00000559886 IGLV3-10A0A075B6K4 115 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 RAD51CO43502 376 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 GREM1O60565 184 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 IRF1P10914 325 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 POU3F3P20264 500 aaPredicted RBP12.57□□□□□ -0.4
HERC1-205ENST00000559886 KCNJ1P48048 391 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 ADAM15Q13444 863 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 BYSLQ13895 437 aaKnown RBP12.57□□□□□ -0.4
HERC1-205ENST00000559886 GRIN2CQ14957 1233 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 NOMO1Q15155 1222 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 FAM133BQ5BKY9 247 aaKnown RBP12.57□□□□□ -0.4
HERC1-205ENST00000559886 RARS2Q5T160 578 aaKnown RBP12.57□□□□□ -0.4
HERC1-205ENST00000559886 RAP1GAP2Q684P5 730 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 ANKRD54Q6NXT1 300 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 C1orf228Q6PIY5 440 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 LRRC31Q6UY01 552 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 MAATS1Q7Z4T9 603 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 CMTM8Q8IZV2 173 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 SLCO2A1Q92959 643 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 PPARGC1AQ9UBK2 798 aaKnown RBP12.57□□□□□ -0.4
HERC1-205ENST00000559886 STOML2Q9UJZ1 356 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 VANGL2Q9ULK5 521 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 ARHGAP26Q9UNA1 814 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 MFHAS1Q9Y4C4 1052 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 HEY1Q9Y5J3 304 aa12.57□□□□□ -0.4
HERC1-205ENST00000559886 FGF10O15520 208 aaPredicted RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 LATS1O95835 1130 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 RHOXF2BP0C7M4 288 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 PTGIRP43119 386 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 VCPP55072 806 aaKnown RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 GBE1Q04446 702 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 SLC10A2Q12908 348 aaPredicted RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 DHX34Q14147 1143 aaKnown RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 OASLQ15646 514 aaKnown RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 CCDC70Q6NSX1 233 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 RWDD4Q6NW29 188 aaKnown RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 FBXL22Q6P050 247 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 SYCE2Q6PIF2 218 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 TMCO3Q6UWJ1 677 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 GPR149Q86SP6 731 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 CCDC105Q8IYK2 499 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 ATL2Q8NHH9 583 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 RHOXF2Q9BQY4 288 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 DTLQ9NZJ0 730 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 FEZ2Q9UHY8 353 aaPredicted RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 AGO1Q9UL18 857 aaKnown RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 DRG1Q9Y295 367 aaKnown RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 MRPS23Q9Y3D9 190 aaKnown RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 MTCH2Q9Y6C9 303 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 GOLGA6L7A0A1B0GV03 622 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 DRGXA6NNA5 263 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 HOXB8P17481 243 aaPredicted RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 CEBPBP17676 345 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 TACR2P21452 398 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 SLC6A4P31645 630 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 AVPR1AP37288 418 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 EIF3EP60228 445 aaKnown RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 MRPS25P82663 173 aaKnown RBP12.56□□□□□ -0.4
HERC1-205ENST00000559886 DR1Q01658 176 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 C5orf22Q49AR2 442 aa12.56□□□□□ -0.4
HERC1-205ENST00000559886 ADGRF1Q5T601 910 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms