RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 WDR72Q3MJ13 1102 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 MPPE1Q53F39 396 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 TMEM215Q68D42 235 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 DSG4Q86SJ6 1040 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 SPATS2Q86XZ4 545 aaKnown RBP10.12□□□□□ -0.79
SMAD3-211ENST00000559460 CXorf38Q8TB03 319 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 ARRDC3Q96B67 414 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 KLHDC7BQ96G42 594 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 FAM84AQ96KN4 292 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 APOLD1Q96LR9 279 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 ACCSQ96QU6 501 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 RSPH9Q9H1X1 276 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-211ENST00000559460 ST6GALNAC4Q9H4F1 302 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 INTS13Q9NVM9 706 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 NLGN3Q9NZ94 848 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 IL37Q9NZH6 218 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 NAGPAQ9UK23 515 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 NUDT5Q9UKK9 219 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 STRIP2Q9ULQ0 834 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 PCDHB11Q9Y5F2 797 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 ENTPD2Q9Y5L3 495 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 NUMA1Q14980 2115 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 CPED1A4D0V7 1026 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 EPB41L2O43491 1005 aaKnown RBP10.11□□□□□ -0.79
SMAD3-211ENST00000559460 LZTS3O60299 673 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-211ENST00000559460 TCEA3O75764 348 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 LIPCP11150 499 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 GARTP22102 1010 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 HARS2P49590 506 aaKnown RBP10.11□□□□□ -0.79
SMAD3-211ENST00000559460 PSEN1P49768 467 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 MAP3K7CLP57077 242 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 TRPC3Q13507 836 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 KCNJ12Q14500 433 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 DENND1CQ8IV53 801 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 MMAAQ8IVH4 418 aaKnown RBP10.11□□□□□ -0.79
SMAD3-211ENST00000559460 SLC25A45Q8N413 288 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 RBBP8NLQ8NC74 664 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-211ENST00000559460 JAKMIP2Q96AA8 810 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 MRPL44Q9H9J2 332 aaKnown RBP10.11□□□□□ -0.79
SMAD3-211ENST00000559460 ABCB8Q9NUT2 735 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 SERGEFQ9UGK8 458 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 GGA2Q9UJY4 613 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 AGO1Q9UL18 857 aaKnown RBP10.11□□□□□ -0.79
SMAD3-211ENST00000559460 DMTF1Q9Y222 760 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 MYH10P35580 1976 aa10.11□□□□□ -0.79
SMAD3-211ENST00000559460 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.1□□□□□ -0.79
SMAD3-211ENST00000559460 A0A1W2PQH9 124 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 VWA3AA6NCI4 1184 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 RIOK3O14730 519 aaKnown RBP10.1□□□□□ -0.79
SMAD3-211ENST00000559460 GCNT3O95395 438 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 C7P10643 843 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 PABPC1P11940 636 aaKnown RBP10.1□□□□□ -0.79
SMAD3-211ENST00000559460 TGM2P21980 687 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 MAT2AP31153 395 aaKnown RBP10.1□□□□□ -0.79
SMAD3-211ENST00000559460 SLC5A2P31639 672 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 SLC8A1P32418 973 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 PSMD8P48556 350 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 ADPRHP54922 357 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 KCNAB2Q13303 367 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 ZNF177Q13360 481 aaPredicted RBP10.1□□□□□ -0.79
SMAD3-211ENST00000559460 MORC3Q14149 939 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 TMEM119Q4V9L6 283 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 MBLAC2Q68D91 279 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 SCARA3Q6AZY7 606 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 RSRC2Q7L4I2 434 aaKnown RBP10.1□□□□□ -0.79
SMAD3-211ENST00000559460 DYMQ7RTS9 669 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 GPD1LQ8N335 351 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 CPXM2Q8N436 756 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 OR5B17Q8NGF7 314 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 WDR48Q8TAF3 677 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 PRR11Q96HE9 360 aaPredicted RBP10.1□□□□□ -0.79
SMAD3-211ENST00000559460 IKZF4Q9H2S9 585 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 PCIF1Q9H4Z3 704 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMAD3-211ENST00000559460 UCKL1Q9NWZ5 548 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 CLEC4EQ9ULY5 219 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 SCML2Q9UQR0 700 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 PCDHA5Q9Y5H7 936 aa10.1□□□□□ -0.79
SMAD3-211ENST00000559460 ZNF233A6NK53 670 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 PRAMEF26H0Y7S4 382 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 PLD2O14939 933 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 KIAA0391O15091 583 aaKnown RBP10.09□□□□□ -0.79
SMAD3-211ENST00000559460 SIN3BO75182 1162 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 RTN2O75298 545 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 PIAS2O75928 621 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 ADH1BP00325 375 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 KLKB1P03952 638 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 JMJD7P0C870 316 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 FAM200BP0CF97 657 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 GOT1P17174 413 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 TNNI1P19237 187 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 HLA-FP30511 346 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 UBA7P41226 1012 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 PGFP49763 221 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 ZNF445P59923 1031 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 PPP2CBP62714 309 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 PPP2CAP67775 309 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 EHHADHQ08426 723 aa10.09□□□□□ -0.79
SMAD3-211ENST00000559460 EFEMP1Q12805 493 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms