RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SLC2A13Q96QE2 648 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 GABRG3Q99928 467 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SLC6A17Q9H1V8 727 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SMOC1Q9H4F8 434 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNX1-207ENST00000559401 THAP10Q9P2Z0 257 aaPredicted RBP8.49□□□□□ -1.05
SNX1-207ENST00000559401 XPO7Q9UIA9 1087 aaKnown RBP8.49□□□□□ -1.05
SNX1-207ENST00000559401 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
SNX1-207ENST00000559401 STAP1Q9ULZ2 295 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 CYP8B1Q9UNU6 501 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 PLA2G4CQ9UP65 541 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SIK3Q9Y2K2 1263 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 DAAM1Q9Y4D1 1078 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 ZNF292O60281 2723 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 NUP205Q92621 2012 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 SDK1Q7Z5N4 2213 aa8.49□□□□□ -1.05
SNX1-207ENST00000559401 MUC22E2RYF6 1773 aaPredicted RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 KCNU1A8MYU2 1149 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 PRR5-ARHGAP8B1AHC4 643 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 TIMM44O43615 452 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 MOCS3O95396 460 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 IGLV3-25P01717 112 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 ATP5BP06576 529 aaKnown RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 HLA-EP13747 358 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 ZNF18P17022 549 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 PTMSP20962 102 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 KCNA4P22459 653 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 PRKCHP24723 683 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 CD70P32970 193 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 CDH5P33151 784 aaPredicted RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 NOS2P35228 1153 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 GGCXP38435 758 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 MATKP42679 507 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 NUMBP49757 651 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 JAM2P57087 298 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 ST8SIA6P61647 398 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 TPM4P67936 248 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 NOMO3P69849 1222 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 ARHGAP8P85298 464 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 CDR2Q01850 454 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 RPL6Q02878 288 aaKnown RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 DEUP1Q05D60 604 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 SF3A2Q15428 464 aaKnown RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 RSPO4Q2I0M5 234 aaPredicted RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 KLHL40Q2TBA0 621 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 FUT11Q495W5 492 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 RABGAP1LQ5R372 815 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 MPP7Q5T2T1 576 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 PMS2CLQ68D20 193 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 TMEM215Q68D42 235 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 MBLAC2Q68D91 279 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 MMS22LQ6ZRQ5 1243 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 PHLDB2Q86SQ0 1253 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 CIR1Q86X95 450 aaPredicted RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 ZNF677Q86XU0 584 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 DHX40Q8IX18 779 aaKnown RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 DEFB119Q8N690 84 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 ZNF397Q8NF99 534 aaPredicted RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 OLIG1Q8TAK6 271 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 DDX1Q92499 740 aaKnown RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 PIGKQ92643 395 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 RMDN1Q96DB5 314 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 MYEOVQ96EZ4 313 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 RPRD1AQ96P16 312 aaPredicted RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 ERGIC2Q96RQ1 377 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 BPIFA3Q9BQP9 254 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 C11orf70Q9BRQ4 267 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 IRX2Q9BZI1 471 aaPredicted RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 PRDM16Q9HAZ2 1276 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 RRN3Q9NYV6 651 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 NOCTQ9UK39 431 aaKnown RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 PCDHGA5Q9Y5G8 931 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 ABCA7Q8IZY2 2146 aa8.48□□□□□ -1.05
SNX1-207ENST00000559401 ATXN2Q99700 1313 aaKnown RBP8.48□□□□□ -1.05
SNX1-207ENST00000559401 CKAP5Q14008 2032 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 MYO15AQ9UKN7 3530 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 NYNRINQ9P2P1 1898 aaKnown RBP8.47□□□□□ -1.05
SNX1-207ENST00000559401 TEX33O43247 280 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 AP5Z1O43299 807 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 GDF9O60383 454 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 FOXD2O60548 495 aaPredicted RBP8.47□□□□□ -1.05
SNX1-207ENST00000559401 NDUFS2O75306 463 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 ZNF217O75362 1048 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 LUC7L3O95232 432 aaKnown RBP8.47□□□□□ -1.05
SNX1-207ENST00000559401 CAVIN2O95810 425 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 F9P00740 461 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 SERPINC1P01008 464 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 DLDP09622 509 aaKnown RBP8.47□□□□□ -1.05
SNX1-207ENST00000559401 ACADMP11310 421 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 SDHBP21912 280 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 FLT3P36888 993 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 CSKP41240 450 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 NSFP46459 744 aaKnown RBP8.47□□□□□ -1.05
SNX1-207ENST00000559401 GABRB2P47870 512 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 FMO1Q01740 532 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 CENPCQ03188 943 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 LMAN2Q12907 356 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 MAP7D1Q3KQU3 841 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms