RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 RNF214Q8ND24 703 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 DDI1Q8WTU0 396 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 CENPIQ92674 756 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 TMA16Q96EY4 203 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 SERPINB11Q96P15 392 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 GABRG3Q99928 467 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 EPC1Q9H2F5 836 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 MTG2Q9H4K7 406 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 DDIT4Q9NX09 232 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 CACNA2D2Q9NY47 1150 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 COX16Q9P0S2 106 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 EBF1Q9UH73 591 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 INVSQ9Y283 1065 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 DAAM1Q9Y4D1 1078 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 NUP205Q92621 2012 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 GVINP1Q7Z2Y8 2422 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 THADAQ6YHU6 1953 aa13.11□□□□□ -0.31
RABGGTA-207ENST00000558936 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 CAPN9O14815 690 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 SART1O43290 800 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 TBL1XO60907 577 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 PAGE1O75459 146 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 CNTN5O94779 1100 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 TACR2P21452 398 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 BCKDHBP21953 392 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 RRM1P23921 792 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 PRKCHP24723 683 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 CTSOP43234 321 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 HDAC4P56524 1084 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 NME3Q13232 169 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 LPAL2Q16609 132 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 MPPE1Q53F39 396 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 ALFQ53S48 1182 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 CXorf57Q6NSI4 855 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 MCOLN2Q8IZK6 566 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 APCDD1Q8J025 514 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 ZNF513Q8N8E2 541 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 CYB5D2Q8WUJ1 264 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 RXFP2Q8WXD0 754 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 VOPP1Q96AW1 172 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 MRGPRX3Q96LB0 322 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 RBSNQ9H1K0 784 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 PARD6AQ9NPB6 346 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 THAP10Q9P2Z0 257 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 MBD1Q9UIS9 605 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
RABGGTA-207ENST00000558936 FAM72CH0Y354 149 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 RNF103O00237 685 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 ATMINO43313 823 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 SERPINC1P01008 464 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 C7P10643 843 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 FERP16591 822 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 GABRG2P18507 467 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 MZF1P28698 734 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 SULT1E1P49888 294 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 CDK17Q00537 523 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 AUHQ13825 339 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 SLC25A52Q3SY17 297 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 FAM72AQ5TYM5 149 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 RALGAPA1Q6GYQ0 2036 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 ACAD10Q6JQN1 1059 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 FAM72DQ6L9T8 149 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 CYP4V2Q6ZWL3 525 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 ARCQ7LC44 396 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 LONP2Q86WA8 852 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 FAM72BQ86X60 149 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 ZDHHC17Q8IUH5 632 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 UNC45BQ8IWX7 931 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 LGI2Q8N0V4 545 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 FAM160A2Q8N612 972 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 ZNF366Q8N895 744 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 ANKRD20A12PQ8NF67 263 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 CCDC26Q8TAB7 109 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 FIBINQ8TAL6 211 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 RLN3Q8WXF3 142 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 XPO6Q96QU8 1125 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 TPSD1Q9BZJ3 242 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 TMEM245Q9H330 911 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 ABCB8Q9NUT2 735 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 ELOVL2Q9NXB9 296 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 STIM2Q9P246 746 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 ARHGAP20Q9P2F6 1191 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 SLC8A2Q9UPR5 921 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 OR51B4Q9Y5P0 310 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 GON4LQ3T8J9 2241 aa13.09□□□□□ -0.31
RABGGTA-207ENST00000558936 DOCK9Q9BZ29 2069 aa13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 A0A1W2PQJ5 194 aa13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 TPM2P07951 284 aa13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 HLA-EP13747 358 aa13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 PTMSP20962 102 aa13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 COPAP53621 1224 aa13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 ZNF234Q14588 700 aa13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 ASTE1Q2TB18 679 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 MAP7D1Q3KQU3 841 aa13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 MPP7Q5T2T1 576 aa13.08□□□□□ -0.32
RABGGTA-207ENST00000558936 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms