RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 VWA3AA6NCI4 1184 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 VWC2LB2RUY7 222 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 B4E171 279 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 F5H0A9 414 aaPredicted RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 STX16-NPEPL1H3BU86 382 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 STX16O14662 325 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 ZNF213O14771 459 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 BAIAP3O94812 1187 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 C1RP00736 705 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 ERBB2P04626 1255 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 FAM163BP0C2L3 166 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 EBLN1P0CF75 366 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 ALADP13716 330 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 ENGP17813 658 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 CYP3A7P24462 503 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 SLC8A1P32418 973 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 ARL1P40616 181 aaPredicted RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 TSPAN7P41732 249 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 LIFRP42702 1097 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 EIF5P55010 431 aaKnown RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 CFHR3Q02985 330 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 PDCLQ13371 301 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 THOC5Q13769 683 aaKnown RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 CBWD5Q5RIA9 395 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 L1TD1Q5T7N2 865 aaKnown RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 LIPMQ5VYY2 423 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 C4orf50Q6ZRC1 276 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 GRASPQ7Z6J2 395 aaPredicted RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 PEG10Q86TG7 708 aaKnown RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 RFFLQ8WZ73 363 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 ZNF764Q96H86 408 aaPredicted RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 SNX18Q96RF0 628 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 USP29Q9HBJ7 922 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 PREBQ9HCU5 417 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 GAR1Q9NY12 217 aaKnown RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 FBXO9Q9UK97 447 aaPredicted RBP4.91□□□□□ -1.62
CASC4-206ENST00000558847 RAB21Q9UL25 225 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 ARHGAP26Q9UNA1 814 aa4.91□□□□□ -1.62
CASC4-206ENST00000558847 CA12O43570 354 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 CCNT1O60563 726 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 HEXIM1O94992 359 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 CHN1P15882 459 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 FBLP22087 321 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 PCSK6P29122 969 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 PGM1P36871 562 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 RXRGP48443 463 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 CCT8P50990 548 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 NAP1L1P55209 391 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 SOX10P56693 466 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 GPC5P78333 572 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 DEUP1Q05D60 604 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 LMAN2Q12907 356 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 GPR68Q15743 365 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 CNGA3Q16281 694 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 BAK1Q16611 211 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 PCID2Q5JVF3 399 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 ZNF484Q5JVG2 852 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 OLFML1Q6UWY5 402 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 SLC29A4Q7RTT9 530 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 HEATR4Q86WZ0 1026 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 ADGRG3Q86Y34 549 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 ENDOVQ8N8Q3 282 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 ST8SIA4Q92187 359 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 MCRS1Q96EZ8 462 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 EDC3Q96F86 508 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 RBM17Q96I25 401 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 HS6ST2Q96MM7 605 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 THAP7Q9BT49 309 aaPredicted RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 HTATIP2Q9BUP3 242 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 ADGRE3Q9BY15 652 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 PRDM13Q9H4Q3 707 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 SAP30LQ9HAJ7 183 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 PLEKHA2Q9HB19 425 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 PDE11AQ9HCR9 933 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 ADARB2Q9NS39 739 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 ABHD10Q9NUJ1 306 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 MAP3K20Q9NYL2 800 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 FOXJ2Q9P0K8 574 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 CNOT7Q9UIV1 285 aaKnown RBP4.9□□□□□ -1.63
CASC4-206ENST00000558847 FZD4Q9ULV1 537 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 MAFFQ9ULX9 164 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 PCDHB2Q9Y5E7 798 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 PCDHA10Q9Y5I2 948 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 SCINQ9Y6U3 715 aa4.9□□□□□ -1.63
CASC4-206ENST00000558847 TISP43B9A030 160 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 H0YIZ8 118 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 M0QZQ0 153 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 MGST3O14880 152 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 KLK10O43240 276 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 TMEM63AO94886 807 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 DDX58O95786 925 aaKnown RBP4.89□□□□□ -1.63
CASC4-206ENST00000558847 WEE2P0C1S8 567 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 CPA1P15085 419 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 IGFBP2P18065 325 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 GALNSP34059 522 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 PLA2G5P39877 138 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 PDE1CQ14123 709 aaPredicted RBP4.89□□□□□ -1.63
CASC4-206ENST00000558847 RUNDC3AQ59EK9 446 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 SYCE2Q6PIF2 218 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 KIRREL2Q6UWL6 708 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms