RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 WISP1O95388 367 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 ECEL1O95672 775 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 GABRG2P18507 467 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 HOXD12P35452 270 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 HOXD13P35453 343 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 FAM193AP78312 1265 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 RPL6Q02878 288 aaKnown RBP10.23□□□□□ -0.77
SPG11-212ENST00000558790 SUZ12Q15022 739 aaKnown RBP10.23□□□□□ -0.77
SPG11-212ENST00000558790 DUOXA2Q1HG44 320 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 SPDYCQ5MJ68 293 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 TDRD10Q5VZ19 366 aaKnown RBP10.23□□□□□ -0.77
SPG11-212ENST00000558790 FAM173BQ6P4H8 233 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 CCDC73Q6ZRK6 1079 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 TRAPPC11Q7Z392 1133 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 MIB1Q86YT6 1006 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 DEFB119Q8N690 84 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 ZNF513Q8N8E2 541 aaPredicted RBP10.23□□□□□ -0.77
SPG11-212ENST00000558790 OR2I1PQ8NGU4 316 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 OR6B3Q8NGW1 331 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 FBXO32Q969P5 355 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 GTPBP2Q9BX10 602 aaKnown RBP10.23□□□□□ -0.77
SPG11-212ENST00000558790 CEP44Q9C0F1 390 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 SNX25Q9H3E2 840 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 SOX17Q9H6I2 414 aaPredicted RBP10.23□□□□□ -0.77
SPG11-212ENST00000558790 CAPN10Q9HC96 672 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.23□□□□□ -0.77
SPG11-212ENST00000558790 MUC22E2RYF6 1773 aaPredicted RBP10.23□□□□□ -0.77
SPG11-212ENST00000558790 E2F8A0AVK6 867 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 UPK3BL1B0FP48 263 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 UPK3BL2E5RIL1 263 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 TRIM24O15164 1050 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 HOXC11O43248 304 aaPredicted RBP10.22□□□□□ -0.77
SPG11-212ENST00000558790 AP5Z1O43299 807 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 TULP3O75386 442 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 TACC1O75410 805 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 CTSBP07858 339 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 DLATP10515 647 aaKnown RBP10.22□□□□□ -0.77
SPG11-212ENST00000558790 HOXB2P14652 356 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 PTPN1P18031 435 aaKnown RBP10.22□□□□□ -0.77
SPG11-212ENST00000558790 GNL1P36915 607 aaPredicted RBP10.22□□□□□ -0.77
SPG11-212ENST00000558790 DPP6P42658 865 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 TNFRSF4P43489 277 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 TNNC1P63316 161 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 CEBPZQ03701 1054 aaKnown RBP10.22□□□□□ -0.77
SPG11-212ENST00000558790 SURF1Q15526 300 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 SNRNP35Q16560 246 aaKnown RBP10.22□□□□□ -0.77
SPG11-212ENST00000558790 C10orf76Q5T2E6 689 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 BBS7Q8IWZ6 715 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 HDDC3Q8N4P3 179 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 MINDY1Q8N5J2 469 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 NAT16Q8N8M0 369 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 TERB1Q8NA31 727 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 WBP2Q969T9 261 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 ERLEC1Q96DZ1 483 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 CGRRF1Q99675 332 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 B3GNT5Q9BYG0 378 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 NRSN2Q9GZP1 204 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 CCSER2Q9H7U1 834 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 CD93Q9NPY3 652 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 TBC1D14Q9P2M4 693 aa10.22□□□□□ -0.77
SPG11-212ENST00000558790 IGHV1OR15-9A0A0B4J2B8 117 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 A0A1W2PQF6 199 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 TBC1D3BA6NDS4 549 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 CST3P01034 146 aaPredicted RBP10.21□□□□□ -0.77
SPG11-212ENST00000558790 SERPINF2P08697 491 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 IRF1P10914 325 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 YWHAQP27348 245 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 WASP42768 502 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 ST13P50502 369 aaKnown RBP10.21□□□□□ -0.77
SPG11-212ENST00000558790 SLC5A3P53794 718 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 ATXN3P54252 364 aaPredicted RBP10.21□□□□□ -0.77
SPG11-212ENST00000558790 GAD2Q05329 585 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 CYP24A1Q07973 514 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 SCAPQ12770 1279 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 BYSLQ13895 437 aaKnown RBP10.21□□□□□ -0.77
SPG11-212ENST00000558790 DUOXA1Q1HG43 343 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 ANO4Q32M45 955 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 WDR72Q3MJ13 1102 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 ERICH6BQ5W0A0 696 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 EGFLAMQ63HQ2 1017 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 TRMT11Q7Z4G4 463 aaKnown RBP10.21□□□□□ -0.77
SPG11-212ENST00000558790 SLC41A1Q8IVJ1 513 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 SULF2Q8IWU5 870 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 CCDC65Q8IXS2 484 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 NUP93Q8N1F7 819 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 PDILTQ8N807 584 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 PDZD8Q8NEN9 1154 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 SCAMP5Q8TAC9 235 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 OVCA2Q8WZ82 227 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 OTUB2Q96DC9 234 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 HSPA12BQ96MM6 686 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 KCNK16Q96T55 309 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 PANK2Q9BZ23 570 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 SMYD3Q9H7B4 428 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 CD248Q9HCU0 757 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 AGPAT3Q9NRZ7 376 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 GMIPQ9P107 970 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 SH3BP1Q9Y3L3 701 aa10.21□□□□□ -0.77
SPG11-212ENST00000558790 UTP20O75691 2785 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms