RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MTMR11A4FU01 709 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 C5orf67F2Z3F1 127 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 H7C4K7 107 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 EEF2KO00418 725 aaKnown RBP13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ADAM12O43184 909 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 CREB3O43889 395 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 GCATO75600 419 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 DNAJB1P25685 340 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 HCAR3P49019 387 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 LMAN1P49257 510 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 MAGOHP61326 146 aaKnown RBP13.36□□□□□ -0.27
SMAD3-207ENST00000558763 HIF1AQ16665 826 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 LONRF1Q17RB8 773 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 SCN4BQ8IWT1 228 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 CCDC13Q8IYE1 715 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 AGGF1Q8N302 714 aaeCLIP13.36□□□□□ -0.27
SMAD3-207ENST00000558763 NPWQ8N729 165 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 FBXO22Q8NEZ5 403 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 CCDC110Q8TBZ0 833 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 POF1BQ8WVV4 589 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ARNTL2Q8WYA1 636 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 CASP10Q92851 521 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 LGMNQ99538 433 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 TCF25Q9BQ70 676 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ROPN1BQ9BZX4 212 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-207ENST00000558763 TKTL2Q9H0I9 626 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ROPN1Q9HAT0 212 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ENTPD7Q9NQZ7 604 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 MRPL17Q9NRX2 175 aaKnown RBP13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ARHGEF38Q9NXL2 777 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 PAK5Q9P286 719 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 SCML2Q9UQR0 700 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 PCDHB5Q9Y5E4 795 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 SHROOM3Q8TF72 1996 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 DOCK4Q8N1I0 1966 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 A0A1W2PQH9 124 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 GRM6O15303 877 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 CHADO15335 359 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ERCC2P18074 760 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 GCAP28676 217 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 SLCO1A2P46721 670 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ATP1A2P50993 1020 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 GPX6P59796 221 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ERVFC1P60507 584 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ERVK-21P61565 698 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 IFI35P80217 286 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-207ENST00000558763 BASP1P80723 227 aaKnown RBP13.36□□□□□ -0.27
SMAD3-207ENST00000558763 IFRD2Q12894 506 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-207ENST00000558763 GPR17Q13304 367 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 CEP128Q6ZU80 1094 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 SPPL3Q8TCT6 385 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 SAMD11Q96NU1 681 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 ABCC13Q9NSE7 274 aa13.36□□□□□ -0.27
SMAD3-207ENST00000558763 SZT2Q5T011 3432 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.35□□□□□ -0.27
SMAD3-207ENST00000558763 C5orf60A6NFR6 353 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 SMIM23A6NLE4 172 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 HACD1B0YJ81 288 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 SMAPO00193 183 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 TRIM66O15016 1216 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
SMAD3-207ENST00000558763 SOAT2O75908 522 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 METTL18O95568 372 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 CTSAP10619 480 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 OR1D2P34982 312 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 PDIA2Q13087 525 aaKnown RBP13.35□□□□□ -0.27
SMAD3-207ENST00000558763 HP1BP3Q5SSJ5 553 aaPredicted RBP13.35□□□□□ -0.27
SMAD3-207ENST00000558763 FAXCQ5TGI0 409 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 CENPUQ71F23 418 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 ZNF534Q76KX8 674 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 ZBED8Q8IZ13 594 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 NUP93Q8N1F7 819 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 TIFAQ96CG3 184 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 TRIM62Q9BVG3 475 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 WDCPQ9H6R7 721 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 TLR9Q9NR96 1032 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 RAB6BQ9NRW1 208 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 CTNNAL1Q9UBT7 734 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 STK39Q9UEW8 545 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 XPO7Q9UIA9 1087 aaKnown RBP13.35□□□□□ -0.27
SMAD3-207ENST00000558763 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.35□□□□□ -0.27
SMAD3-207ENST00000558763 TRIOBPQ9H2D6 2365 aa13.35□□□□□ -0.27
SMAD3-207ENST00000558763 TLDC2A0PJX2 215 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 EIF3HO15372 352 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMAD3-207ENST00000558763 LRIG2O94898 1065 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 RB1P06400 928 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 HPDP32754 393 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-207ENST00000558763 DMTNQ08495 405 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 GPM6BQ13491 265 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 C6orf118Q5T5N4 469 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 MANEALQ5VSG8 457 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 MSANTD2Q6P1R3 559 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 RNF19BQ6ZMZ0 732 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 IGDCC3Q8IVU1 814 aa13.34□□□□□ -0.27
SMAD3-207ENST00000558763 TFB1MQ8WVM0 346 aaKnown RBP13.34□□□□□ -0.27
SMAD3-207ENST00000558763 HTR3CQ8WXA8 447 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms