RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SLFN11Q7Z7L1 901 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 CPNE8Q86YQ8 564 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 ETFBKMTQ8IXQ9 262 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 CD101Q93033 1021 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 XPO6Q96QU8 1125 aaKnown RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 MAGEB5Q9BZ81 275 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 FOXQ1Q9C009 403 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 MFSD1Q9H3U5 465 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 DNAJC17Q9NVM6 304 aaKnown RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 STIM2Q9P246 746 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 NDRG2Q9UN36 371 aaKnown RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 A0A0U1RQJ8 604 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 STK25O00506 426 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 PRPSAP2O60256 369 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 CACNG3O60359 315 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 TULP3O75386 442 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 PROSCO94903 275 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 NOP2P46087 812 aaKnown RBP18.03■□□□□ 0.48
TPM1-214ENST00000558544 GALK1P51570 392 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 CCDC173Q0VFZ6 552 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 SCAPQ12770 1279 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 MESDQ14696 234 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 UBXN2BQ14CS0 331 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 TCEAL1Q15170 157 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 EFHC2Q5JST6 749 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 C1orf228Q6PIY5 440 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 CIR1Q86X95 450 aaPredicted RBP18.03■□□□□ 0.48
TPM1-214ENST00000558544 FLCNQ8NFG4 579 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 ATRIPQ8WXE1 791 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 IGSF8Q969P0 613 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 RPRD1AQ96P16 312 aaPredicted RBP18.03■□□□□ 0.48
TPM1-214ENST00000558544 P2RY13Q9BPV8 354 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 IRX2Q9BZI1 471 aaPredicted RBP18.03■□□□□ 0.48
TPM1-214ENST00000558544 LACRTQ9GZZ8 138 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 LTB4R2Q9NPC1 389 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 GPATCH2LQ9NWQ4 482 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 FZD10Q9ULW2 581 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 CLEC4EQ9ULY5 219 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 USP18Q9UMW8 372 aa18.03■□□□□ 0.48
TPM1-214ENST00000558544 A0A0A6YYK5 440 aaPredicted RBP18.02■□□□□ 0.47
TPM1-214ENST00000558544 KANSL1LA0AUZ9 987 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 TRIM24O15164 1050 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 PJA2O43164 708 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 TARSP26639 723 aaKnown RBP18.02■□□□□ 0.47
TPM1-214ENST00000558544 PCK1P35558 622 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 EIF2DP41214 584 aaKnown RBP18.02■□□□□ 0.47
TPM1-214ENST00000558544 SSR1P43307 286 aaKnown RBP18.02■□□□□ 0.47
TPM1-214ENST00000558544 IRAK1P51617 712 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 AIF1P55008 147 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 MESP2Q0VG99 397 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 RABGAP1LQ5R372 815 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 CYP4V2Q6ZWL3 525 aaPredicted RBP18.02■□□□□ 0.47
TPM1-214ENST00000558544 PYROXD2Q8N2H3 581 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 C1orf74Q96LT6 269 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 NCAPGQ9BPX3 1015 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 SNRNP25Q9BV90 132 aaKnown RBP18.02■□□□□ 0.47
TPM1-214ENST00000558544 FBRSL1Q9HCM7 1045 aaKnown RBP18.02■□□□□ 0.47
TPM1-214ENST00000558544 DEC1Q9P2X7 70 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 LCMT1Q9UIC8 334 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 SALL4Q9UJQ4 1053 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 AP4E1Q9UPM8 1137 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 ADGRG1Q9Y653 693 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 DUSP10Q9Y6W6 482 aa18.02■□□□□ 0.47
TPM1-214ENST00000558544 KMT2EQ8IZD2 1858 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 FAM86C2PA6NEL3 165 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.01■□□□□ 0.47
TPM1-214ENST00000558544 E9PAM4 449 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 FAM72CH0Y354 149 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 BUB1O43683 1085 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 SRGAP2O75044 1071 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 IL1R2P27930 398 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 MAN1A1P33908 653 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 ARHGAP25P42331 645 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 SLC25A11Q02978 314 aaKnown RBP18.01■□□□□ 0.47
TPM1-214ENST00000558544 SMTNL2Q2TAL5 461 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 MPP7Q5T2T1 576 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 ERMARDQ5T6L9 678 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 ACBD5Q5T8D3 534 aaPredicted RBP18.01■□□□□ 0.47
TPM1-214ENST00000558544 FAM72AQ5TYM5 149 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 CWF19L1Q69YN2 538 aaKnown RBP18.01■□□□□ 0.47
TPM1-214ENST00000558544 GRAMD4Q6IC98 578 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 FAM72DQ6L9T8 149 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 FSTL4Q6MZW2 842 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 LRRC31Q6UY01 552 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 FAM72BQ86X60 149 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 MFN1Q8IWA4 741 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 ZNF683Q8IZ20 524 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 TXLNBQ8N3L3 684 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 CARNMT1Q8N4J0 409 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 WFDC5Q8TCV5 224 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 PNKPQ96T60 521 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 OSBPL2Q9H1P3 480 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 KCNF1Q9H3M0 494 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 ZWILCHQ9H900 591 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 ARHGEF4Q9NR80 690 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 TRIM10Q9UDY6 481 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 OR12D3Q9UGF7 316 aa18.01■□□□□ 0.47
TPM1-214ENST00000558544 MRPS17Q9Y2R5 130 aaKnown RBP18.01■□□□□ 0.47
TPM1-214ENST00000558544 MTF2Q9Y483 593 aaPredicted RBP18.01■□□□□ 0.47
TPM1-214ENST00000558544 LUC7L3O95232 432 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms