RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SYN2Q92777 582 aaPredicted RBP8.79□□□□□ -1
TPM1-213ENST00000558400 PIWIL1Q96J94 861 aaKnown RBP8.79□□□□□ -1
TPM1-213ENST00000558400 C1orf74Q96LT6 269 aa8.79□□□□□ -1
TPM1-213ENST00000558400 NPY6RQ99463 290 aa8.79□□□□□ -1
TPM1-213ENST00000558400 EPC1Q9H2F5 836 aa8.79□□□□□ -1
TPM1-213ENST00000558400 TSPY26PQ9H489 355 aa8.79□□□□□ -1
TPM1-213ENST00000558400 FAM204AQ9H8W3 233 aa8.79□□□□□ -1
TPM1-213ENST00000558400 ADAM22Q9P0K1 906 aa8.79□□□□□ -1
TPM1-213ENST00000558400 HELZP42694 1942 aaKnown RBP8.78□□□□□ -1
TPM1-213ENST00000558400 FASNP49327 2511 aaKnown RBP8.78□□□□□ -1
TPM1-213ENST00000558400 A0A1W2PQJ5 194 aa8.78□□□□□ -1
TPM1-213ENST00000558400 ANKRD62A6NC57 917 aa8.78□□□□□ -1
TPM1-213ENST00000558400 SIGLEC16A6NMB1 481 aa8.78□□□□□ -1
TPM1-213ENST00000558400 PRRT4C9JH25 899 aa8.78□□□□□ -1
TPM1-213ENST00000558400 F5H5T6 163 aa8.78□□□□□ -1
TPM1-213ENST00000558400 CBFA2T2O43439 604 aa8.78□□□□□ -1
TPM1-213ENST00000558400 HRO43593 1189 aa8.78□□□□□ -1
TPM1-213ENST00000558400 TBL1XO60907 577 aa8.78□□□□□ -1
TPM1-213ENST00000558400 MOCS3O95396 460 aa8.78□□□□□ -1
TPM1-213ENST00000558400 KRT3P12035 628 aa8.78□□□□□ -1
TPM1-213ENST00000558400 GZMAP12544 262 aa8.78□□□□□ -1
TPM1-213ENST00000558400 DESP17661 470 aa8.78□□□□□ -1
TPM1-213ENST00000558400 HOXD9P28356 352 aaPredicted RBP8.78□□□□□ -1
TPM1-213ENST00000558400 CXCR3P49682 368 aa8.78□□□□□ -1
TPM1-213ENST00000558400 GSCP56915 257 aaPredicted RBP8.78□□□□□ -1
TPM1-213ENST00000558400 CENPCQ03188 943 aa8.78□□□□□ -1
TPM1-213ENST00000558400 DEUP1Q05D60 604 aa8.78□□□□□ -1
TPM1-213ENST00000558400 MESP2Q0VG99 397 aa8.78□□□□□ -1
TPM1-213ENST00000558400 NME3Q13232 169 aa8.78□□□□□ -1
TPM1-213ENST00000558400 SLC12A1Q13621 1099 aa8.78□□□□□ -1
TPM1-213ENST00000558400 NFKBIBQ15653 356 aa8.78□□□□□ -1
TPM1-213ENST00000558400 CLEC16AQ2KHT3 1053 aa8.78□□□□□ -1
TPM1-213ENST00000558400 ARL13BQ3SXY8 428 aa8.78□□□□□ -1
TPM1-213ENST00000558400 FAM133BQ5BKY9 247 aaKnown RBP8.78□□□□□ -1
TPM1-213ENST00000558400 RABGAP1LQ5R372 815 aa8.78□□□□□ -1
TPM1-213ENST00000558400 RNF43Q68DV7 783 aa8.78□□□□□ -1
TPM1-213ENST00000558400 ACAD10Q6JQN1 1059 aa8.78□□□□□ -1
TPM1-213ENST00000558400 RFWD3Q6PCD5 774 aa8.78□□□□□ -1
TPM1-213ENST00000558400 LRSAM1Q6UWE0 723 aa8.78□□□□□ -1
TPM1-213ENST00000558400 CEP68Q76N32 757 aa8.78□□□□□ -1
TPM1-213ENST00000558400 KIAA0907Q7Z7F0 614 aaPredicted RBP8.78□□□□□ -1
TPM1-213ENST00000558400 MFN1Q8IWA4 741 aa8.78□□□□□ -1
TPM1-213ENST00000558400 AHI1Q8N157 1196 aa8.78□□□□□ -1
TPM1-213ENST00000558400 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.78□□□□□ -1
TPM1-213ENST00000558400 SUMF1Q8NBK3 374 aa8.78□□□□□ -1
TPM1-213ENST00000558400 SLC30A5Q8TAD4 765 aa8.78□□□□□ -1
TPM1-213ENST00000558400 GAB3Q8WWW8 586 aa8.78□□□□□ -1
TPM1-213ENST00000558400 BAP1Q92560 729 aa8.78□□□□□ -1
TPM1-213ENST00000558400 RUBCNQ92622 972 aa8.78□□□□□ -1
TPM1-213ENST00000558400 LOXL4Q96JB6 756 aa8.78□□□□□ -1
TPM1-213ENST00000558400 SEPT11Q9NVA2 429 aaKnown RBP8.78□□□□□ -1
TPM1-213ENST00000558400 C2orf42Q9NWW7 574 aa8.78□□□□□ -1
TPM1-213ENST00000558400 KIAA1522Q9P206 1035 aaPredicted RBP8.78□□□□□ -1
TPM1-213ENST00000558400 THAP10Q9P2Z0 257 aaPredicted RBP8.78□□□□□ -1
TPM1-213ENST00000558400 TMEM59LQ9UK28 342 aa8.78□□□□□ -1
TPM1-213ENST00000558400 LUC7L2Q9Y383 392 aaKnown RBP8.78□□□□□ -1
TPM1-213ENST00000558400 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.78□□□□□ -17e-7■■□□□ 12.5
TPM1-213ENST00000558400 MYOFQ9NZM1 2061 aa8.77□□□□□ -1
TPM1-213ENST00000558400 SYNJ2BP-COX16A0A087WUM0 186 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 GOLGA6L7A0A1B0GV03 622 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 LRRC53A6NM62 1247 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 H0Y626 953 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 GOLGA8SH3BPF8 625 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 SGK1O00141 431 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 TRIM24O15164 1050 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 SYNCRIPO60506 623 aaKnown RBP8.77□□□□□ -1.01
TPM1-213ENST00000558400 FOXD2O60548 495 aaPredicted RBP8.77□□□□□ -1.01
TPM1-213ENST00000558400 ADAM23O75077 832 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 ZNF217O75362 1048 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 RPP40O75818 363 aaKnown RBP8.77□□□□□ -1.01
TPM1-213ENST00000558400 RHOBTB1O94844 696 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 ENDOD1O94919 500 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 MOCS2O96007 188 aaPredicted RBP8.77□□□□□ -1.01
TPM1-213ENST00000558400 ASLP04424 464 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 PABPC1P11940 636 aaKnown RBP8.77□□□□□ -1.01
TPM1-213ENST00000558400 HOXB2P14652 356 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 PDGFRAP16234 1089 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 POLR2EP19388 210 aaKnown RBP8.77□□□□□ -1.01
TPM1-213ENST00000558400 TACR2P21452 398 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 HLA-FP30511 346 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 SLC6A4P31645 630 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 PRKCIP41743 596 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 SULT1E1P49888 294 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 ZBED6P86452 979 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 SULT2A1Q06520 285 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 KLHL30Q0D2K2 578 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 PDAP1Q13442 181 aaKnown RBP8.77□□□□□ -1.01
TPM1-213ENST00000558400 CDH18Q13634 790 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 STARD3Q14849 445 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 ASIC2Q16515 512 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 GEN1Q17RS7 908 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 LAIR1Q6GTX8 287 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 NADSYN1Q6IA69 706 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 TMEM92Q6UXU6 159 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 LRRC31Q6UY01 552 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 MMS22LQ6ZRQ5 1243 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 CHST9Q7L1S5 443 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 VPS36Q86VN1 386 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 RASSF3Q86WH2 238 aa8.77□□□□□ -1.01
TPM1-213ENST00000558400 CHSY1Q86X52 802 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms