RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 DCTN1Q14203 1278 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 RALBP1Q15311 655 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBRG1Q3YBR2 411 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 DENND2CQ68D51 928 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3GQ6DHY5 549 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3CQ6IPX1 549 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 KIAA1324Q6UXG2 1013 aaKnown RBP5.2□□□□□ -1.58
PRPF39-212ENST00000557477 BCDIN3DQ7Z5W3 292 aaKnown RBP5.2□□□□□ -1.58
PRPF39-212ENST00000557477 GGNQ86UU5 652 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 HEATR4Q86WZ0 1026 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 ULK2Q8IYT8 1036 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3Q8IZP1 549 aaPredicted RBP5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TEX19Q8NA77 164 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 MAFAQ8NHW3 353 aaPredicted RBP5.2□□□□□ -1.58
PRPF39-212ENST00000557477 SLC2A12Q8TD20 617 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 UBE2Q2Q8WVN8 375 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 KTI12Q96EK9 354 aaPredicted RBP5.2□□□□□ -1.58
PRPF39-212ENST00000557477 KAZALD1Q96I82 304 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 HERC2P3Q9BVR0 1158 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 PLEKHA2Q9HB19 425 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 ALG13Q9NP73 1137 aaKnown RBP5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TMEM160Q9NX00 188 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 ASIC5Q9NY37 505 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 ZNF69Q9UC07 566 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 PNMA2Q9UL42 364 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 FZD4Q9ULV1 537 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 GCOM1H8Y6P7 765 aaPredicted RBP5.19□□□□□ -1.58
PRPF39-212ENST00000557477 HOXC11O43248 304 aaPredicted RBP5.19□□□□□ -1.58
PRPF39-212ENST00000557477 EXOC3O60645 756 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 KAT7O95251 611 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 C1RP00736 705 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 CYP3A4P08684 503 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 CNPP09543 421 aaKnown RBP5.19□□□□□ -1.58
PRPF39-212ENST00000557477 CSF1P09603 554 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 C6P13671 934 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 MATN1P21941 496 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 MCM2P49736 904 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 TUBP50607 506 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 CFHR3Q02985 330 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 TLE3Q04726 772 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 DLGAP5Q15398 846 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 TSTD2Q5T7W7 516 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 MAP3K21Q5TCX8 1036 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 KYAT3Q6YP21 454 aaKnown RBP5.19□□□□□ -1.58
PRPF39-212ENST00000557477 RINLQ6ZS11 566 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 Q8N1X5 172 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 TERB1Q8NA31 727 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 NAXEQ8NCW5 288 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 LINS1Q8NG48 757 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D5Q92609 795 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 PPM1MQ96MI6 270 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 BBC3Q96PG8 261 aaPredicted RBP5.19□□□□□ -1.58
PRPF39-212ENST00000557477 TOR3AQ9H497 397 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 WASH6PQ9NQA3 447 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 IL17RBQ9NRM6 502 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 BAG5Q9UL15 447 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 HS3ST3A1Q9Y663 406 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 FRMPD1Q5SYB0 1578 aa5.19□□□□□ -1.58
PRPF39-212ENST00000557477 UHRF1BP1Q6BDS2 1440 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 FYB1O15117 783 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 TACR2P21452 398 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 DUSP1P28562 367 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 LIFRP42702 1097 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 RARRES1P49788 294 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 AGTR2P50052 363 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 RCAN1P53805 252 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 WDR5P61964 334 aaKnown RBP5.18□□□□□ -1.58
PRPF39-212ENST00000557477 TLE2Q04725 743 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 CHRNDQ07001 517 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 TBX2Q13207 712 aaPredicted RBP5.18□□□□□ -1.58
PRPF39-212ENST00000557477 MFSD13AQ14CX5 517 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 INTS11Q5TA45 600 aaKnown RBP5.18□□□□□ -1.58
PRPF39-212ENST00000557477 WDR93Q6P2C0 686 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 DBX2Q6ZNG2 339 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 BBS12Q6ZW61 710 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 SLC29A4Q7RTT9 530 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 ZNF804AQ7Z570 1209 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 SLC9A6Q92581 669 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 HTRA1Q92743 480 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 MPP4Q96JB8 637 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 REEP2Q9BRK0 252 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 NOD2Q9HC29 1040 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 TMLHEQ9NVH6 421 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 PI4KBQ9UBF8 816 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 ADAM21Q9UKJ8 722 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 ATP10BO94823 1461 aa5.18□□□□□ -1.58
PRPF39-212ENST00000557477 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-212ENST00000557477 VWA3AA6NCI4 1184 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 TMEM191CA6NGB0 347 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 J3KRW8 73 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 HNRNPCP07910 306 aaKnown RBP eCLIP5.17□□□□□ -1.58
PRPF39-212ENST00000557477 ACP5P13686 325 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 ATF7P17544 494 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-212ENST00000557477 NDUFS1P28331 727 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 G3BP1Q13283 466 aaKnown RBP eCLIP5.17□□□□□ -1.58
PRPF39-212ENST00000557477 TRPC3Q13507 836 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 CTXN3Q4LDR2 81 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 AWAT1Q58HT5 328 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 FSIP1Q8NA03 581 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 AKAP1Q92667 903 aaKnown RBP eCLIP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms