RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 NUP93Q8N1F7 819 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 ZCCHC9Q8N567 271 aaKnown RBP13.32□□□□□ -0.28
PSEN1-219ENST00000556951 TC2NQ8N9U0 490 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 CCDC112Q8NEF3 446 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 ZNF397Q8NF99 534 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-219ENST00000556951 CADM4Q8NFZ8 388 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 NEK11Q8NG66 645 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 RHBDD1Q8TEB9 315 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 OVCA2Q8WZ82 227 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 BAP1Q92560 729 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 MED8Q96G25 268 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 GPR174Q9BXC1 333 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 MKRN2Q9H000 416 aaKnown RBP13.32□□□□□ -0.28
PSEN1-219ENST00000556951 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
PSEN1-219ENST00000556951 LUC7L2Q9Y383 392 aaKnown RBP13.32□□□□□ -0.28
PSEN1-219ENST00000556951 SH3BP1Q9Y3L3 701 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 BOD1L1Q8NFC6 3051 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 LRBAP50851 2863 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 CABIN1Q9Y6J0 2220 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 TERTO14746 1132 aaKnown RBP13.31□□□□□ -0.28
PSEN1-219ENST00000556951 P4HA2O15460 535 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 MFAP3LO75121 409 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 SKILP12757 684 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 NCAM1P13591 858 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 TYRP14679 529 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 TRIM21P19474 475 aaKnown RBP13.31□□□□□ -0.28
PSEN1-219ENST00000556951 MATKP42679 507 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 FMO5P49326 533 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 KLK7P49862 253 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 ZBED6P86452 979 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 TLE3Q04726 772 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 CETN1Q12798 172 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 ENPP2Q13822 863 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 SMAD1Q15797 465 aaKnown RBP13.31□□□□□ -0.28
PSEN1-219ENST00000556951 PTPRNQ16849 979 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 EXOC3L4Q17RC7 722 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
PSEN1-219ENST00000556951 FUT11Q495W5 492 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 SDE2Q6IQ49 451 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 KIAA1324Q6UXG2 1013 aaKnown RBP13.31□□□□□ -0.28
PSEN1-219ENST00000556951 PDZD8Q8NEN9 1154 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 OR8K1Q8NGG5 319 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 PARD3BQ8TEW8 1205 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 FBXO32Q969P5 355 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 ANKRD36BP1Q96IX9 119 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 CDC6Q99741 560 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 KLF16Q9BXK1 252 aaPredicted RBP13.31□□□□□ -0.28
PSEN1-219ENST00000556951 TTYH3Q9C0H2 523 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 PLCB1Q9NQ66 1216 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
PSEN1-219ENST00000556951 MARK1Q9P0L2 795 aa13.31□□□□□ -0.28
PSEN1-219ENST00000556951 A0A1B0GVT2 93 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 GOLGA8CPA6NN73 597 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 ESPNB1AK53 854 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 BCAT2O15382 392 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 FLRT2O43155 660 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 ZBTB24O43167 697 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 RTN3O95197 1032 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 TBX18O95935 607 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 TRIM49P0CI25 452 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 TRIM49CP0CI26 452 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 ACO1P21399 889 aaKnown RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 KRT9P35527 623 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 TUBP50607 506 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 CCZ1BP86790 482 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 CCZ1P86791 482 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 GOLGA8FQ08AF8 430 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 GOLGA8DPQ0D2H9 430 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 PSMD6Q15008 389 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 C1orf220Q5T0J3 134 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 DCAF12L1Q5VU92 463 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 SNIP1Q8TAD8 396 aaKnown RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 NXPE2Q96DL1 559 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 MMS19Q96T76 1030 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 BAG1Q99933 345 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 CRACR2AQ9BSW2 395 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 BBS2Q9BXC9 721 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 NAA15Q9BXJ9 866 aaKnown RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 MIR1-1HGQ9H1L0 117 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 FAM207AQ9NSI2 230 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 GMIPQ9P107 970 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 EIF2B4Q9UI10 523 aaKnown RBP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.3□□□□□ -0.28
PSEN1-219ENST00000556951 STON1Q9Y6Q2 735 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 FBN3Q75N90 2809 aa13.3□□□□□ -0.28
PSEN1-219ENST00000556951 MEI4A8MW99 385 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 NEDD8-MDP1E9PL57 170 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 RNF225M0QZC1 329 aaPredicted RBP13.29□□□□□ -0.28
PSEN1-219ENST00000556951 PLK4O00444 970 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 CER1O95813 267 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 IGLV3-19P01714 112 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 IRF1P10914 325 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 CR2P20023 1033 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 POU3F2P20265 443 aaPredicted RBP13.29□□□□□ -0.28
PSEN1-219ENST00000556951 MSNP26038 577 aaKnown RBP13.29□□□□□ -0.28
PSEN1-219ENST00000556951 PON1P27169 355 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms