RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ENTPD7Q9NQZ7 604 aa5.57□□□□□ -1.52
ATXN3-244ENST00000556898 ST7Q9NRC1 585 aa5.57□□□□□ -1.52
ATXN3-244ENST00000556898 ADAM22Q9P0K1 906 aa5.57□□□□□ -1.52
ATXN3-244ENST00000556898 CNOT8Q9UFF9 292 aaKnown RBP5.57□□□□□ -1.52
ATXN3-244ENST00000556898 KIAA1257Q9ULG3 409 aa5.57□□□□□ -1.52
ATXN3-244ENST00000556898 SORCS3Q9UPU3 1222 aa5.57□□□□□ -1.52
ATXN3-244ENST00000556898 HYOU1Q9Y4L1 999 aa5.57□□□□□ -1.52
ATXN3-244ENST00000556898 BACE2Q9Y5Z0 518 aa5.57□□□□□ -1.52
ATXN3-244ENST00000556898 PLXNA4Q9HCM2 1894 aa5.57□□□□□ -1.52
ATXN3-244ENST00000556898 ZDBF2Q9HCK1 2354 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 TCRBV5S1A1TA0A578 114 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 MED19A0JLT2 244 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 ARHGEF37A1IGU5 675 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 MACROD2A1Z1Q3 448 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 MEGF11A6BM72 1044 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 C2orf71A6NGG8 1288 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 TMEM110-MUSTN1A8MSY1 372 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 F8VP50 259 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 FANCGO15287 622 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 PJA2O43164 708 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 PAPSS1O43252 624 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 TGM5O43548 720 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 NRDCO43847 1150 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 GRAP2O75791 330 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 ABLIM3O94929 683 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 CCDC175P0C221 793 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 TMEM253P0C7T8 217 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 FAM200BP0CF97 657 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 HAPLN1P10915 354 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 ESRRAP11474 423 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 GZMAP12544 262 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 ATF6P18850 670 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 MMP8P22894 467 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 PPM1AP35813 382 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 NSFP46459 744 aaKnown RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 TKTL1P51854 596 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 BCAT1P54687 386 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 KRT83P78385 493 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 OGDHQ02218 1023 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 ADCY1Q08828 1119 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 ADIGQ0VDE8 80 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 BST2Q10589 180 aaKnown RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 GPR17Q13304 367 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 PUM1Q14671 1186 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 SPRED3Q2MJR0 410 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 MGAT5BQ3V5L5 792 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 RPS26P11Q5JNZ5 115 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 DAB2IPQ5VWQ8 1189 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 SLC8B1Q6J4K2 584 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 TRNP1Q6NT89 227 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 SYCE2Q6PIF2 218 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 TRIM72Q6ZMU5 477 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 VPS36Q86VN1 386 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 ZSCAN30Q86W11 494 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 ERICH1Q86X53 443 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 XYLT1Q86Y38 959 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 VN1R2Q8NFZ6 395 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 SCAMP5Q8TAC9 235 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 SPATA18Q8TC71 538 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 RMDN1Q96DB5 314 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 NECTIN4Q96NY8 510 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 ULBP1Q9BZM6 244 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 CLEC4MQ9H2X3 399 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 MFSD1Q9H3U5 465 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 FAM124BQ9H5Z6 455 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 C12orf49Q9H741 205 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 CYP4F11Q9HBI6 524 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 RXFP1Q9HBX9 757 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 METTL5Q9NRN9 209 aaKnown RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 MRPL17Q9NRX2 175 aaKnown RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 HESX1Q9UBX0 185 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 GUCA1BQ9UMX6 200 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 PCDHB5Q9Y5E4 795 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 CAPN6Q9Y6Q1 641 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 WDFY4Q6ZS81 3184 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 COL4A4P53420 1690 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-244ENST00000556898 CACNA1HO95180 2353 aa5.56□□□□□ -1.52
ATXN3-244ENST00000556898 NCANO14594 1321 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 ANKRD62A6NC57 917 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 SLC38A8A6NNN8 435 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 YJEFN3A6XGL0 299 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 E7ENQ6 273 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 XPO1O14980 1071 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 CLASP2O75122 1294 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 KRT37O76014 449 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 LSM8O95777 96 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 B3GALT4O96024 378 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 LMNAP02545 664 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 CYP1A2P05177 515 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 USP17L7P0C7H9 530 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 SETSIPP0DME0 302 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 TCF4P15884 667 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 EPCAMP16422 314 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 TFE3P19532 575 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 KLRC2P26717 231 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 ANXA13P27216 316 aa5.55□□□□□ -1.52
ATXN3-244ENST00000556898 NOP2P46087 812 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 RPL34P49207 117 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 RNASE9P60153 205 aaKnown RBP5.55□□□□□ -1.52
ATXN3-244ENST00000556898 RPL7AP62424 266 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms