RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 RASA4BC9J798 803 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 PPP1R12AO14974 1030 aaPredicted RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 IRAK2O43187 625 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 RASA4O43374 803 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 IGLV3-25P01717 112 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 BRAFP15056 766 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 FGFR3P22607 806 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 PKN2Q16513 984 aaKnown RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 MGAT5BQ3V5L5 792 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 VSTM1Q6UX27 236 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 PPP1R21Q6ZMI0 780 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 NLRP14Q86W24 1093 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 MAML1Q92585 1016 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 PRMT1Q99873 361 aaKnown RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 KIF9Q9HAQ2 790 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 GMIPQ9P107 970 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 WASHC5Q12768 1159 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 ANKRD33Q7Z3H0 272 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 FUBP3Q96I24 572 aaKnown RBP eCLIP18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 XPO6Q96QU8 1125 aaKnown RBP18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 CCT8L2Q96SF2 557 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 PAGE1O75459 146 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 KRT15P19012 456 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 MAGEA9P43362 315 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 MPP2Q14168 576 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 ZNF567Q8N184 647 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 MPP5Q8N3R9 675 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 ATXN2LQ8WWM7 1075 aaKnown RBP18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 PHACTR1Q9C0D0 580 aa18.85■□□□□ 0.61
SDR39U1-220ENST00000556548 GMNCA6NCL1 334 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 TBX18O95935 607 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 RPL17P18621 184 aaKnown RBP18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 PSMB4P28070 264 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 GLUD2P49448 558 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 GEMIN4P57678 1058 aaKnown RBP18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 EIF4EBP2Q13542 120 aaPredicted RBP18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 FAM117BQ6P1L5 589 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 ZNF534Q76KX8 674 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 PID1Q7Z2X4 250 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 TADA2BQ86TJ2 420 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 TAX1BP1Q86VP1 789 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 PDCD7Q8N8D1 485 aaKnown RBP18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 C8orf48Q96LL4 319 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 TRIM62Q9BVG3 475 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 SMOC2Q9H3U7 446 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 MAD1L1Q9Y6D9 718 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 MTMR11A4FU01 709 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 OR6C75A6NL08 312 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 HOXA2O43364 376 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 SPAG7O75391 227 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 STK10O94804 968 aaKnown RBP18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 CXCL10P02778 98 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 CCR1P32246 355 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 HCAR3P49019 387 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 SF3A3Q12874 501 aaKnown RBP eCLIP18.84■□□□□ 0.611e-6■■□□□ 12.4
SDR39U1-220ENST00000556548 DUSP4Q13115 394 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 PDZD4Q76G19 769 aaPredicted RBP18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 GIPC2Q8TF65 315 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 PAFAH2Q99487 392 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 PRDM16Q9HAZ2 1276 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 ARHGEF38Q9NXL2 777 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 SCML2Q9UQR0 700 aa18.84■□□□□ 0.61
SDR39U1-220ENST00000556548 TCRBV9S1A1TA0A576 114 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 C2CD2LO14523 706 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 VNN2O95498 520 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 ATP2A2P16615 1042 aaKnown RBP18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 MAGEA6P43360 314 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 OLIG2Q13516 323 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 SEMA5AQ13591 1074 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 SPARCL1Q14515 664 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 C4orf22Q6V702 233 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 PRPF39Q86UA1 669 aaKnown RBP18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 MON1AQ86VX9 555 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 C4orf33Q8N1A6 199 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 ZNF473Q8WTR7 871 aaKnown RBP18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 FCRL2Q96LA5 508 aaPredicted RBP18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 TTPALQ9BTX7 342 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 MRPL9Q9BYD2 267 aaKnown RBP18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 ACSS3Q9H6R3 686 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 KLHL8Q9P2G9 620 aaPredicted RBP18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 ZC3H7BQ9UGR2 993 aaKnown RBP18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 CDY1Q9Y6F8 540 aa18.83■□□□□ 0.61
SDR39U1-220ENST00000556548 A0A1W2PPM1 405 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 ADAM12O43184 909 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 CRADDP78560 199 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 KBTBD12Q3ZCT8 623 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 BEND5Q7L4P6 421 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 GDAP1Q8TB36 358 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 FBXO32Q969P5 355 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 AGAP3Q96P47 875 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 FERMT1Q9BQL6 677 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 FBXO44Q9H4M3 255 aa18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 PSMC3IPQ9P2W1 217 aaPredicted RBP18.83■□□□□ 0.6
SDR39U1-220ENST00000556548 ALDH7A1P49419 539 aaKnown RBP18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 EFEMP1Q12805 493 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 TRABD2AQ86V40 505 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 TDRPQ86YL5 185 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 LRRC43Q8N309 656 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 RIBC1Q8N443 379 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms