RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 METTL23Q86XA0 190 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 DCP1BQ8IZD4 617 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 MAB21L3Q8N8X9 362 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 CXorf38Q8TB03 319 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 KLHL6Q8WZ60 621 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 CHAMP1Q96JM3 812 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 PKMYT1Q99640 499 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 SEPT5Q99719 369 aaPredicted RBP9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 KIF9Q9HAQ2 790 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 POLR3BQ9NW08 1133 aaPredicted RBP9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 SLC8A2Q9UPR5 921 aa9.6□□□□□ -0.87
GTF2A1-204ENST00000556268 NOL4O94818 638 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 KRT1P04264 644 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 GSTM1P09488 218 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 ARSAP15289 507 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 ATF4P18848 351 aaPredicted RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 NMT1P30419 496 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 AVPR1AP37288 418 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 UBA7P41226 1012 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 SLC7A5Q01650 507 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 CCDC6Q16204 474 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 NFE2Q16621 373 aaPredicted RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 HSF5Q4G112 596 aaPredicted RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 AASDHQ4L235 1098 aaPredicted RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 ZC2HC1CQ53FD0 456 aaPredicted RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 ADALQ6DHV7 355 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 LIMS2Q7Z4I7 341 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 ZNF605Q86T29 641 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 SLCO6A1Q86UG4 719 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 GPBP1Q86WP2 473 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 LEO1Q8WVC0 666 aaPredicted RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 RAD54LQ92698 747 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 ANAPC16Q96DE5 110 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 TRMT2BQ96GJ1 504 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 CDK5RAP3Q96JB5 506 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 GCNAQ96QF7 691 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 P2RY13Q9BPV8 354 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 ACBD6Q9BR61 282 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 PYM1Q9BRP8 204 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 KLHL25Q9H0H3 589 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 ECT2Q9H8V3 914 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 VPS45Q9NRW7 570 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 GCNT4Q9P109 453 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 AGO2Q9UKV8 859 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 WASF3Q9UPY6 502 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 SCN1AP35498 2009 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 CACNA1GO43497 2377 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 SPAG17Q6Q759 2223 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 ATG2BQ96BY7 2078 aa9.59□□□□□ -0.87
GTF2A1-204ENST00000556268 LAMA1P25391 3075 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 BCLAF3A2AJT9 711 aaKnown RBP9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 DBX1A6NMT0 343 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 TISP43B9A030 160 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 GABRDO14764 452 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 CSH1P0DML2 217 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 CSH2P0DML3 217 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 CDR1P51861 262 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 KIR3DS1Q14943 382 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 POSTNQ15063 836 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 TCEAL1Q15170 157 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 TAF12Q16514 161 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 ERICH6BQ5W0A0 696 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 NAIF1Q69YI7 327 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 EFCAB13Q8IY85 973 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 ADCY4Q8NFM4 1077 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 SPATA18Q8TC71 538 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 OSCP1Q8WVF1 389 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 MRPS31Q92665 395 aaKnown RBP9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 CALML4Q96GE6 196 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 SLC22A12Q96S37 553 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 CYP2S1Q96SQ9 504 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 LINC00597Q9H2U6 94 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 CAPN10Q9HC96 672 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 GDAP2Q9NXN4 497 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 WHRNQ9P202 907 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 SF3B6Q9Y3B4 125 aaKnown RBP9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 CEP295Q9C0D2 2601 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 GREB1Q4ZG55 1949 aa9.58□□□□□ -0.88
GTF2A1-204ENST00000556268 NUP210Q8TEM1 1887 aaPredicted RBP9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 K7ENM7 598 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 DCLK1O15075 740 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 TADA3O75528 432 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 RHOBTB1O94844 696 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 IL18RAPO95256 599 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 APBB3O95704 486 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 CAVIN2O95810 425 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 EPHX1P07099 455 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 PROS1P07225 676 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 C1QTNF9P0C862 333 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 CCDC192P0DO97 292 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 CYP2F1P24903 491 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 LONP1P36776 959 aaKnown RBP9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 MPLP40238 635 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 PNPLA4P41247 253 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 GPR15P49685 360 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 GRIN1Q05586 938 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 BFSP1Q12934 665 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 ZNF77Q15935 545 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 DDR2Q16832 855 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 SV2CQ496J9 727 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms