RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 FBXL22Q6P050 247 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 CFAP52Q8N1V2 620 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 CALR3Q96L12 384 aaKnown RBP14.63□□□□□ -0.07
SNX6-206ENST00000556162 MFSD1Q9H3U5 465 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 DEC1Q9P2X7 70 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 OR12D3Q9UGF7 316 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 FZD10Q9ULW2 581 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 MRPS17Q9Y2R5 130 aaKnown RBP14.63□□□□□ -0.07
SNX6-206ENST00000556162 DUSP10Q9Y6W6 482 aa14.63□□□□□ -0.07
SNX6-206ENST00000556162 TICRRQ7Z2Z1 1910 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.62□□□□□ -0.07
SNX6-206ENST00000556162 CACNG3O60359 315 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 SRGAP2O75044 1071 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 MAN1A1P33908 653 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 EIF2DP41214 584 aaKnown RBP14.62□□□□□ -0.07
SNX6-206ENST00000556162 SLC6A11P48066 632 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 GALK1P51570 392 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 RPS24P62847 133 aaKnown RBP14.62□□□□□ -0.07
SNX6-206ENST00000556162 GAB4Q2WGN9 574 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 PREPLQ4J6C6 727 aaPredicted RBP14.62□□□□□ -0.07
SNX6-206ENST00000556162 BOLA3Q53S33 107 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 TTC39BQ5VTQ0 682 aaPredicted RBP14.62□□□□□ -0.07
SNX6-206ENST00000556162 DAB2IPQ5VWQ8 1189 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 TXNDC11Q6PKC3 985 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 C14orf80Q86SX3 495 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 CCDC117Q8IWD4 279 aaPredicted RBP14.62□□□□□ -0.07
SNX6-206ENST00000556162 CD101Q93033 1021 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 CHFRQ96EP1 664 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 MYEOVQ96EZ4 313 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 PRICKLE1Q96MT3 831 aaPredicted RBP14.62□□□□□ -0.07
SNX6-206ENST00000556162 PPP1R9BQ96SB3 815 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 NELL2Q99435 816 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 P2RY13Q9BPV8 354 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 STIM2Q9P246 746 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 SNX10Q9Y5X0 201 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 F5P12259 2224 aa14.62□□□□□ -0.07
SNX6-206ENST00000556162 KANSL1LA0AUZ9 987 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 TMEM221A6NGB7 291 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 E9PAM4 449 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 M0R296 226 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 TULP3O75386 442 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 CCDC175P0C221 793 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 HOXD9P28356 352 aaPredicted RBP14.61□□□□□ -0.07
SNX6-206ENST00000556162 OPRD1P41143 372 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 SGSHP51688 502 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 PON2Q15165 354 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 PSTKQ8IV42 348 aaKnown RBP14.61□□□□□ -0.07
SNX6-206ENST00000556162 ETFBKMTQ8IXQ9 262 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 ZNF557Q8N988 423 aaPredicted RBP14.61□□□□□ -0.07
SNX6-206ENST00000556162 P2RY11Q96G91 374 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
SNX6-206ENST00000556162 PNKPQ96T60 521 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 SLC2A11Q9BYW1 496 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 EPHX3Q9H6B9 360 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 DNAJC17Q9NVM6 304 aaKnown RBP14.61□□□□□ -0.07
SNX6-206ENST00000556162 BUB1O43683 1085 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 SLC1A1P43005 524 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 NRG1Q02297 640 aaPredicted RBP14.61□□□□□ -0.07
SNX6-206ENST00000556162 GRSF1Q12849 480 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNX6-206ENST00000556162 IFI16Q16666 785 aaKnown RBP14.61□□□□□ -0.07
SNX6-206ENST00000556162 C5orf22Q49AR2 442 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 C12orf40Q86WS4 652 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 IGSF8Q969P0 613 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 PEBP4Q96S96 227 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 MAGEB5Q9BZ81 275 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 TSGA10Q9BZW7 698 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 DHX35Q9H5Z1 703 aaKnown RBP14.61□□□□□ -0.07
SNX6-206ENST00000556162 ZWILCHQ9H900 591 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 TBC1D17Q9HA65 648 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 SALL4Q9UJQ4 1053 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 FBXO10Q9UK96 956 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 AP4E1Q9UPM8 1137 aa14.61□□□□□ -0.07
SNX6-206ENST00000556162 MYOFQ9NZM1 2061 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 SHISA7A6NL88 538 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 DRGXA6NNA5 263 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 BUB1BO60566 1050 aaPredicted RBP14.6□□□□□ -0.07
SNX6-206ENST00000556162 TCF4P15884 667 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 DRD1P21728 446 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 IL1R2P27930 398 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 L1CAMP32004 1257 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 DGKGP49619 791 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 UBXN2BQ14CS0 331 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 KCNT1Q5JUK3 1230 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 NAIF1Q69YI7 327 aaPredicted RBP14.6□□□□□ -0.07
SNX6-206ENST00000556162 GRAMD4Q6IC98 578 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 NUDT18Q6ZVK8 323 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 MFN1Q8IWA4 741 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 SUGP1Q8IWZ8 645 aaKnown RBP14.6□□□□□ -0.07
SNX6-206ENST00000556162 ZNF683Q8IZ20 524 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 PYROXD2Q8N2H3 581 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 CARNMT1Q8N4J0 409 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 FLCNQ8NFG4 579 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 EPAS1Q99814 870 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 SNRNP25Q9BV90 132 aaKnown RBP14.6□□□□□ -0.07
SNX6-206ENST00000556162 FBRSL1Q9HCM7 1045 aaKnown RBP14.6□□□□□ -0.07
SNX6-206ENST00000556162 ARHGEF4Q9NR80 690 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 GPATCH2LQ9NWQ4 482 aa14.6□□□□□ -0.07
SNX6-206ENST00000556162 NDRG2Q9UN36 371 aaKnown RBP14.6□□□□□ -0.07
SNX6-206ENST00000556162 IGLV3-10A0A075B6K4 115 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 A0A1B0GVM2 712 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms