RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 HERVK_113Q902F9 699 aa15.17■□□□□ 0.02
VPS33B-205ENST00000556096 IGSF21Q96ID5 467 aa15.17■□□□□ 0.02
VPS33B-205ENST00000556096 SERPINB11Q96P15 392 aa15.17■□□□□ 0.02
VPS33B-205ENST00000556096 PPCSQ9HAB8 311 aa15.17■□□□□ 0.02
VPS33B-205ENST00000556096 ETNK1Q9HBU6 452 aa15.17■□□□□ 0.02
VPS33B-205ENST00000556096 OSER1Q9NX31 292 aa15.17■□□□□ 0.02
VPS33B-205ENST00000556096 CLIC5Q9NZA1 410 aa15.17■□□□□ 0.02
VPS33B-205ENST00000556096 MTRRQ9UBK8 725 aa15.17■□□□□ 0.02
VPS33B-205ENST00000556096 LAMA2P24043 3122 aaKnown RBP15.17■□□□□ 0.02
VPS33B-205ENST00000556096 A0A0A0MRY4 1105 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 STK10O94804 968 aaKnown RBP15.16■□□□□ 0.02
VPS33B-205ENST00000556096 LRIG2O94898 1065 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 VAV1P15498 845 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 TPSB2P20231 275 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 ATP5DP30049 168 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 PSEN1P49768 467 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 USP46P62068 366 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 RPL10AP62906 217 aaKnown RBP15.16■□□□□ 0.02
VPS33B-205ENST00000556096 TPSAB1Q15661 275 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 LONRF1Q17RB8 773 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 MSS51Q4VC12 460 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 CCDC13Q8IYE1 715 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 VPS52Q8N1B4 723 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 TAB3Q8N5C8 712 aaPredicted RBP15.16■□□□□ 0.02
VPS33B-205ENST00000556096 TTC9BQ8N6N2 239 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 FBXO22Q8NEZ5 403 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 PYROXD1Q8WU10 500 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 ZNF689Q96CS4 500 aaPredicted RBP15.16■□□□□ 0.02
VPS33B-205ENST00000556096 SPATA13Q96N96 652 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 LGMNQ99538 433 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 PRDM12Q9H4Q4 367 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 SFMBT1Q9UHJ3 866 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 LGALS13Q9UHV8 139 aa15.16■□□□□ 0.02
VPS33B-205ENST00000556096 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.16■□□□□ 0.02
VPS33B-205ENST00000556096 SMIM23A6NLE4 172 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 KCNU1A8MYU2 1149 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 METTL18O95568 372 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 MX2P20592 715 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 EPHB2P29323 1055 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 HOXC13P31276 330 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 HPDP32754 393 aaPredicted RBP15.15■□□□□ 0.02
VPS33B-205ENST00000556096 SERPINB6P35237 376 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 FDFT1P37268 417 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 SLCO1A2P46721 670 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 ATP1A2P50993 1020 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 NRG1Q02297 640 aaPredicted RBP15.15■□□□□ 0.02
VPS33B-205ENST00000556096 SEMA5AQ13591 1074 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 MGAT5BQ3V5L5 792 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 ANKRD20A2Q5SQ80 823 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 ANKRD20A1Q5TYW2 823 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 ANKRD20A3Q5VUR7 823 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 ARHGEF18Q6ZSZ5 1173 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 RIBC1Q8N443 379 aaPredicted RBP15.15■□□□□ 0.02
VPS33B-205ENST00000556096 ATP11CQ8NB49 1132 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 LRRN4Q8WUT4 740 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 P2RY11Q96G91 374 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 CNOT10Q9H9A5 744 aaKnown RBP15.15■□□□□ 0.02
VPS33B-205ENST00000556096 RC3H2Q9HBD1 1191 aaKnown RBP15.15■□□□□ 0.02
VPS33B-205ENST00000556096 OLA1Q9NTK5 396 aaKnown RBP15.15■□□□□ 0.02
VPS33B-205ENST00000556096 GMIPQ9P107 970 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 TLR6Q9Y2C9 796 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 SLC27A5Q9Y2P5 690 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 SLC4A7Q9Y6M7 1214 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 LAMA3Q16787 3333 aa15.15■□□□□ 0.02
VPS33B-205ENST00000556096 CARNS1A5YM72 827 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 OPHN1O60890 802 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 CDH16O75309 829 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 SLC2A3P11169 496 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 PHBP35232 272 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 MDH1P40925 334 aaKnown RBP15.14■□□□□ 0.01
VPS33B-205ENST00000556096 IRAK1P51617 712 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 GPX6P59796 221 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 IFI35P80217 286 aaPredicted RBP15.14■□□□□ 0.01
VPS33B-205ENST00000556096 CDK16Q00536 496 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 AP1B1Q10567 949 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 SKIDA1Q1XH10 827 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 BBS9Q3SYG4 887 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 CCDC38Q502W7 563 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 MANEALQ5VSG8 457 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 PRSS55Q6UWB4 352 aaPredicted RBP15.14■□□□□ 0.01
VPS33B-205ENST00000556096 TDRPQ86YL5 185 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 CCNYQ8ND76 341 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 FBXO32Q969P5 355 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 SLC39A13Q96H72 371 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 C1orf74Q96LT6 269 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 CRISPLD1Q9H336 500 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 PRO3102Q9H379 93 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 TLR8Q9NR97 1041 aaKnown RBP15.14■□□□□ 0.01
VPS33B-205ENST00000556096 FETUBQ9UGM5 382 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 SLC12A6Q9UHW9 1150 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 SNX10Q9Y5X0 201 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 CDY1Q9Y6F8 540 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 MYO16Q9Y6X6 1858 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 CLUHO75153 1309 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 MTSS1O43312 755 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 PAGE1O75459 146 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 GNGT1P63211 74 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 ZNF33AQ06730 810 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 PPIDQ08752 370 aaKnown RBP15.14■□□□□ 0.01
VPS33B-205ENST00000556096 GALNT2Q10471 571 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms