RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-222ENST00000555914 MAGEC3Q8TD91 643 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 USP33Q8TEY7 942 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 WBP2Q969T9 261 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 MS4A14Q96JA4 679 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 ZC3H10Q96K80 434 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 ZFRQ96KR1 1074 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 CEP295NLQ96MC4 621 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 GDAP1L1Q96MZ0 367 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 SPAG5Q96R06 1193 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 SIX2Q9NPC8 291 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 SMARCAL1Q9NZC9 954 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 HMGXB4Q9UGU5 601 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 ADAMTS1Q9UHI8 967 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 NAGPAQ9UK23 515 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 NUP205Q92621 2012 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 THADAQ6YHU6 1953 aa9.41□□□□□ -0.9
HNRNPC-222ENST00000555914 TNFRSF10BO14763 440 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 TM4SF5O14894 197 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 AKAP3O75969 853 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 FTCDO95954 541 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 NR3C1P04150 777 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 ATICP31939 592 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 HNRNPH1P31943 449 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 SLC8A1P32418 973 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 LIG3P49916 1009 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 DGKEP52429 567 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 SNRPFP62306 86 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 CLDN10P78369 228 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 PTK2Q05397 1052 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 NR1H3Q13133 447 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 CUL1Q13616 776 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 DHCR24Q15392 516 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 ZNF699Q32M78 642 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 TTMPQ5BVD1 217 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 SPOPLQ6IQ16 392 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 ALKBH5Q6P6C2 394 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 TMEM92Q6UXU6 159 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 CCDC121Q6ZUS5 278 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 FAM35AQ86V20 835 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 SYCE1Q8N0S2 351 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 NUP93Q8N1F7 819 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 RASGEF1CQ8N431 466 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 CCDC33Q8N5R6 958 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 SLC35C1Q96A29 364 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 ZIM3Q96PE6 472 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 PSMB7Q99436 277 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 PACSIN1Q9BY11 444 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 ELOVL4Q9GZR5 314 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 ISCUQ9H1K1 167 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 CCSER2Q9H7U1 834 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 VRTNQ9H8Y1 702 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 EPB41L5Q9HCM4 733 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.4□□□□□ -0.92e-7■■■■■ 31.7
HNRNPC-222ENST00000555914 DMAC2Q9NW81 257 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 CFAP97Q9P2B7 532 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 EBF1Q9UH73 591 aa9.4□□□□□ -0.9
HNRNPC-222ENST00000555914 FREM2Q5SZK8 3169 aa9.4□□□□□ -0.91
HNRNPC-222ENST00000555914 COCHO43405 550 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 APBB3O95704 486 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 H2AFZP0C0S5 128 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 FAM163BP0C2L3 166 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 MBL2P11226 248 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 CCDC130P13994 396 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 EZRP15311 586 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 SLC9A1P19634 815 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 YWHAQP27348 245 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 MPLP40238 635 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 CARSP49589 748 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 SLC5A3P53794 718 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 GUCY2DQ02846 1103 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 NCOA4Q13772 614 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 SLMAPQ14BN4 828 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 PPP2R5EQ16537 467 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 SPDYCQ5MJ68 293 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 C1orf220Q5T0J3 134 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 ANO7Q6IWH7 933 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 H2AFVQ71UI9 128 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 ACOT1Q86TX2 421 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 FUKQ8N0W3 1084 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 ALLCQ8N6M5 410 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 FRMD1Q8N878 549 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 C12orf29Q8N999 325 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 C12orf50Q8NA57 414 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 ZMIZ2Q8NF64 920 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 MDGA1Q8NFP4 955 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 CASKIN2Q8WXE0 1202 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 FBXO32Q969P5 355 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 ACDQ96AP0 544 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 LOXL4Q96JB6 756 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 SLITRK1Q96PX8 696 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 KRT12Q99456 494 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 PAIP2Q9BPZ3 127 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 TTC7AQ9ULT0 858 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 NFU1Q9UMS0 254 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 CAPN7Q9Y6W3 813 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 SGK1O00141 431 aa9.39□□□□□ -0.91
HNRNPC-222ENST00000555914 PGRMC1O00264 195 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms