RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
TUBB3-209ENST00000555609 CASC4Q6P4E1 433 aa16.62■□□□□ 0.25
TUBB3-209ENST00000555609 SLC27A1Q6PCB7 646 aa16.62■□□□□ 0.25
TUBB3-209ENST00000555609 ANKRD13AQ8IZ07 590 aa16.62■□□□□ 0.25
TUBB3-209ENST00000555609 ARNTL2Q8WYA1 636 aa16.62■□□□□ 0.25
TUBB3-209ENST00000555609 ZNF560Q96MR9 790 aa16.62■□□□□ 0.25
TUBB3-209ENST00000555609 B3GNT5Q9BYG0 378 aa16.62■□□□□ 0.25
TUBB3-209ENST00000555609 FAM192AQ9GZU8 254 aa16.62■□□□□ 0.25
TUBB3-209ENST00000555609 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 XPO1O14980 1071 aaKnown RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 DAB1O75553 588 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 GNL1P36915 607 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 GRIA1P42261 906 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 COPAP53621 1224 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 ABCE1P61221 599 aaKnown RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 IRX4P78413 519 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 PDE1BQ01064 536 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 DSG1Q02413 1049 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 SOWAHAQ2M3V2 549 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 OR52E8Q6IFG1 317 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 ALKAL1Q6UXT8 129 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 CCDC185Q8N715 623 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 OR6Y1Q8NGX8 325 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 STON2Q8WXE9 905 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 DCPSQ96C86 337 aaKnown RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 OTUD5Q96G74 571 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 CLMNQ96JQ2 1002 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 C16orf70Q9BSU1 422 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 BRD8Q9H0E9 1235 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 R3HDMLQ9H3Y0 253 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 ZNF395Q9H8N7 513 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 ELP3Q9H9T3 547 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 SPATS2LQ9NUQ6 558 aaKnown RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 DLGAP2Q9P1A6 1054 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 COPG2Q9UBF2 871 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 MARCOQ9UEW3 520 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 MID2Q9UJV3 735 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 NME7Q9Y5B8 376 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 EVPLQ92817 2033 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 A0A088AWK7 358 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 RRN3P2A6NIE6 340 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 RNF103O00237 685 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 MPOP05164 745 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 GOT1P17174 413 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 TFE3P19532 575 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 SPRP35270 261 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 CCNHP51946 323 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-209ENST00000555609 HK2P52789 917 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 BTKQ06187 659 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 PCLAFQ15004 111 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 FSCBQ5H9T9 825 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 METTL21CQ5VZV1 264 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 BNIPLQ7Z465 357 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 LIMS2Q7Z4I7 341 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 SULF1Q8IWU6 871 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 CCDC33Q8N5R6 958 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 P2RY11Q96G91 374 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 TNIP3Q96KP6 325 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 SLC9A7Q96T83 725 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 EBF4Q9BQW3 602 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 APOL6Q9BWW8 343 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 SNX25Q9H3E2 840 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 ZDHHC7Q9NXF8 308 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 CDY2AQ9Y6F7 541 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 CDY1Q9Y6F8 540 aa16.61■□□□□ 0.25
TUBB3-209ENST00000555609 CITO14578 2027 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 MAGEB16A2A368 324 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 ERI2A8K979 691 aaKnown RBP16.6■□□□□ 0.25
TUBB3-209ENST00000555609 TMEM114B3SHH9 223 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 H3BRB1 525 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 PIRO00625 290 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 RALBP11234 206 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 HOXD8P13378 290 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-209ENST00000555609 MGAT1P26572 445 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 AXLP30530 894 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 NOS2P35228 1153 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 HADHAP40939 763 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 RPL10AP62906 217 aaKnown RBP16.6■□□□□ 0.25
TUBB3-209ENST00000555609 IFRD2Q12894 506 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-209ENST00000555609 HNRNPDQ14103 355 aaKnown RBP16.6■□□□□ 0.25
TUBB3-209ENST00000555609 GRIK4Q16099 956 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 NOTUMQ6P988 496 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 PGM2L1Q6PCE3 622 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 ZNF467Q7Z7K2 595 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-209ENST00000555609 C7orf31Q8N865 590 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 ACTRT2Q8TDY3 377 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 PPP2R3CQ969Q6 453 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 NT5C3BQ969T7 300 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 ZNF778Q96MU6 729 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 TSC22D3Q99576 134 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 TUT1Q9H6E5 874 aaKnown RBP16.6■□□□□ 0.25
TUBB3-209ENST00000555609 LRRC40Q9H9A6 602 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 S100A14Q9HCY8 104 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 SNTG2Q9NY99 539 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 IL1RAPL1Q9NZN1 696 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 STAP1Q9ULZ2 295 aa16.6■□□□□ 0.25
TUBB3-209ENST00000555609 AP3B1O00203 1094 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 NCAM2O15394 837 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 MTSS1O43312 755 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ITM2AO43736 263 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms