RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 NPC1O15118 1278 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 AP5Z1O43299 807 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 SYNCRIPO60506 623 aaKnown RBP15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 UCHL3P15374 230 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 TACR2P21452 398 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 LMAN2Q12907 356 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 IL31Q6EBC2 164 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 SASS6Q6UVJ0 657 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 SLC36A4Q6YBV0 504 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 MMS22LQ6ZRQ5 1243 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 KIAA0907Q7Z7F0 614 aaPredicted RBP15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 CIR1Q86X95 450 aaPredicted RBP15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 SLC41A1Q8IVJ1 513 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 AZIN2Q96A70 460 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 HSPA12BQ96MM6 686 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 DDX50Q9BQ39 737 aaKnown RBP15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 PDCL3Q9H2J4 239 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 SYNCQ9H7C4 482 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 PRDM16Q9HAZ2 1276 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 FSCN3Q9NQT6 498 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 FANCLQ9NW38 375 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 DDIT4Q9NX09 232 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 CEP83Q9Y592 693 aa15.4■□□□□ 0.06
EFCAB11-207ENST00000555608 F8VZ95 297 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 KHNYNO15037 678 aaKnown RBP15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 EPHB6O15197 1021 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 HSF2BPO75031 334 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 ZNF217O75362 1048 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 DAB1O75553 588 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 CYP11B1P15538 503 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 GGCXP38435 758 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 LIMK1P53667 647 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 IRX4P78413 519 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 CDK17Q00537 523 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 STX1AQ16623 288 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 PTPRNQ16849 979 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 C2CD6Q53TS8 623 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 TRIM61Q5EBN2 209 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 FSCBQ5H9T9 825 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 PPM1JQ5JR12 505 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 EFHC1Q5JVL4 640 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 OTUD1Q5VV17 481 aaPredicted RBP15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 NOP9Q86U38 636 aaKnown RBP15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 TMPRSS6Q8IU80 811 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 LMLNQ96KR4 655 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 MTG2Q9H4K7 406 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 ASNSD1Q9NWL6 643 aa15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 USP36Q9P275 1121 aaKnown RBP15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 INTS6Q9UL03 887 aaKnown RBP15.39■□□□□ 0.05
EFCAB11-207ENST00000555608 PCDH15Q96QU1 1955 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 NDUFS2O75306 463 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 LUC7L3O95232 432 aaKnown RBP15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 GLI1P08151 1106 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 MMEP08473 750 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 POLR2EP19388 210 aaKnown RBP15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 TFE3P19532 575 aaPredicted RBP15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 CSKP41240 450 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 BPIFB4P59827 614 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 POLR2FP61218 127 aaKnown RBP15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 SLC6A3Q01959 620 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 ZNF33AQ06730 810 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 NME3Q13232 169 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 EIF4EBP2Q13542 120 aaPredicted RBP15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 CDH18Q13634 790 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 MPP7Q5T2T1 576 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 CCDC183Q5T5S1 534 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 SYT12Q8IV01 421 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 ATP6V0D2Q8N8Y2 350 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 SLC20A1Q8WUM9 679 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 DDX1Q92499 740 aaKnown RBP15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 RNF34Q969K3 372 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 SIPA1Q96FS4 1042 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 BTN2A3PQ96KV6 586 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 CNTNAP3BQ96NU0 1288 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 ADAM33Q9BZ11 813 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 CNTNAP3Q9BZ76 1288 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 TMEM245Q9H330 911 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 NLRC4Q9NPP4 1024 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 FAM207AQ9NSI2 230 aaPredicted RBP15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 ANO10Q9NW15 660 aa15.38■□□□□ 0.05
EFCAB11-207ENST00000555608 C4orf47A7E2U8 309 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 KCNU1A8MYU2 1149 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 F5H5T6 163 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 H0Y626 953 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 TIMM44O43615 452 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 GFPT2O94808 682 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 MBD3O95983 291 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 CFIP05156 583 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 CD6P30203 668 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 CDH5P33151 784 aaPredicted RBP15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 CTSOP43234 321 aaPredicted RBP15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 SULT1E1P49888 294 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 IRAK1P51617 712 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 COPB1P53618 953 aaKnown RBP15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 RNASE9P60153 205 aaKnown RBP15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 MYL5Q02045 173 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 CENPCQ03188 943 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 PITRM1Q5JRX3 1037 aa15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 FAM102AQ5T9C2 384 aaPredicted RBP15.37■□□□□ 0.05
EFCAB11-207ENST00000555608 PEAR1Q5VY43 1037 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms