RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 MTA1Q13330 715 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 DPYSQ14117 519 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 NOMO1Q15155 1222 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 RAP1GAP2Q684P5 730 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 NCBP2-AS2Q69YL0 99 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 DARS2Q6PI48 645 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 LRRC31Q6UY01 552 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 GAREM2Q75VX8 874 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 CHSY1Q86X52 802 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 JAMLQ86YT9 394 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 IFT20Q8IY31 132 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 ARL14EPQ8N8R7 260 aaPredicted RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 MAB21L3Q8N8X9 362 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 PPP2R3CQ969Q6 453 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 TBC1D31Q96DN5 1066 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 CYP2S1Q96SQ9 504 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 PNKPQ96T60 521 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 TRIM51Q9BSJ1 452 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 KLF16Q9BXK1 252 aaPredicted RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 LRRC3Q9BY71 257 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 RNF38Q9H0F5 515 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 RAB17Q9H0T7 212 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 IGFLR1Q9H665 355 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 EPB41L5Q9HCM4 733 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 ARHGEF4Q9NR80 690 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 GKN1Q9NS71 199 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 ETNK2Q9NVF9 386 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 SMPD4Q9NXE4 827 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 ZDHHC7Q9NXF8 308 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 DNMT3BQ9UBC3 853 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 DMGDHQ9UI17 866 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 XPO7Q9UIA9 1087 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 DRG1Q9Y295 367 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 UTP11Q9Y3A2 253 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 MFHAS1Q9Y4C4 1052 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 HS3ST4Q9Y661 456 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 E9PAM4 449 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 SGK1O00141 431 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 ACSL4O60488 711 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 STC2O76061 302 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 MAP3K6O95382 1288 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 GAS8O95995 478 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 CKMP06732 381 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 TUBBP07437 444 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 RHOP08100 348 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 RBP3P10745 1247 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 HTR7P34969 479 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 NR2C2P49116 596 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 SLC11A2P49281 568 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 MLLT6P55198 1093 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 NTHL1P78549 312 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 NRG1Q02297 640 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 GBE1Q04446 702 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 PAFAH1B3Q15102 231 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 KCTD19Q17RG1 926 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 ARHGAP15Q53QZ3 475 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 MS4A13Q5J8X5 152 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 GPR158Q5T848 1215 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 PIK3R6Q5UE93 754 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 DRICH1Q6PGQ1 229 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 TMCO3Q6UWJ1 677 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 SYDE1Q6ZW31 735 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 B4GALNT4Q76KP1 1039 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 BZW1Q7L1Q6 419 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 GRASPQ7Z6J2 395 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 C14orf80Q86SX3 495 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 ZC3H18Q86VM9 953 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 DENND1CQ8IV53 801 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 LEMD2Q8NC56 503 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 TTC16Q8NEE8 873 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 SLC35B2Q8TB61 432 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 RSAD2Q8WXG1 361 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 IFT81Q8WYA0 676 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 RUBCNQ92622 972 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 NKD2Q969F2 451 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 MRPL38Q96DV4 380 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 C1orf74Q96LT6 269 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 CDCA3Q99618 268 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 PRKD2Q9BZL6 878 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 TRIM31Q9BZY9 425 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 DPH5Q9H2P9 285 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 CATSPERBQ9H7T0 1116 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 C10orf88Q9H8K7 445 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 VANGL2Q9ULK5 521 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 CPQQ9Y646 472 aa9.96□□□□□ -0.82
HNRNPC-220ENST00000555585 GOLGA6L7A0A1B0GV03 622 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ESYT3A0FGR9 886 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ZSCAN5CA6NGD5 496 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 F5H5T6 163 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ZNF197O14709 1029 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 DCLK1O15075 740 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 FGF10O15520 208 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 MFSD11O43934 449 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 KRT14P02533 472 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ITGAVP06756 1048 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 TACR2P21452 398 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 DDX6P26196 483 aaKnown RBP eCLIP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 CORO1AP31146 461 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 SERPINB6P35237 376 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms