RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TRDMT1O14717 391 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 CTIFO43310 598 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 RAD51CO43502 376 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 PHF2O75151 1096 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 ERCC2P18074 760 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 COILP38432 576 aaPredicted RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 HARS2P49590 506 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 IRAK1P51617 712 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 GBE1Q04446 702 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 SLC10A2Q12908 348 aaPredicted RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 AUHQ13825 339 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 ELF2Q15723 593 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 CYP1B1Q16678 543 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 PRSS36Q5K4E3 855 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 NUGGCQ68CJ6 796 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 NCBP2-AS2Q69YL0 99 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 RFWD3Q6PCD5 774 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 ELMSAN1Q6PJG2 1045 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 VSIG1Q86XK7 387 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 UNC45BQ8IWX7 931 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 TP53INP2Q8IXH6 220 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 ITFG1Q8TB96 612 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 C1orf74Q96LT6 269 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 ZSWIM3Q96MP5 696 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 LRRC19Q9H756 370 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 RCOR3Q9P2K3 495 aaPredicted RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 NEU3Q9UQ49 428 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 PRRC2BQ5JSZ5 2229 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 TRAV19A0A0A6YYK7 116 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 ZNF487B1APH4 448 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 APOC4-APOC2K7ER74 178 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 DCLK1O15075 740 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 TTI1O43156 1089 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 LIASO43766 372 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 APOC2P02655 101 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 CEBPBP17676 345 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 SLC6A4P31645 630 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 ADGRE1Q14246 886 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 CCNG2Q16589 344 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 C8orf74Q6P047 294 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 FBXL22Q6P050 247 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 SYCE2Q6PIF2 218 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 EP400NLQ6ZTU2 488 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 PRUNE1Q86TP1 453 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 ZC3H18Q86VM9 953 aaKnown RBP10.53□□□□□ -0.72
SRP54-208ENST00000555557 CCDC105Q8IYK2 499 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 P3H4Q92791 437 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 IGSF8Q969P0 613 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 PLD4Q96BZ4 506 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 SFXN1Q9H9B4 322 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 DMGDHQ9UI17 866 aaKnown RBP10.53□□□□□ -0.72
SRP54-208ENST00000555557 AGO1Q9UL18 857 aaKnown RBP10.53□□□□□ -0.72
SRP54-208ENST00000555557 CCL26Q9Y258 94 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 MRPS23Q9Y3D9 190 aaKnown RBP10.53□□□□□ -0.72
SRP54-208ENST00000555557 ANAPC1Q9H1A4 1944 aa10.53□□□□□ -0.72
SRP54-208ENST00000555557 ACSL4O60488 711 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 GREM1O60565 184 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 CNTN5O94779 1100 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 IGFBP4P22692 258 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 CHRNA3P32297 505 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 HCAR3P49019 387 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 SLC7A9P82251 487 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 DLX2Q07687 328 aaPredicted RBP10.52□□□□□ -0.72
SRP54-208ENST00000555557 DMTNQ08495 405 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 BYSLQ13895 437 aaKnown RBP10.52□□□□□ -0.72
SRP54-208ENST00000555557 FAM133BQ5BKY9 247 aaKnown RBP10.52□□□□□ -0.72
SRP54-208ENST00000555557 MANEALQ5VSG8 457 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 CHSY1Q86X52 802 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 CIR1Q86X95 450 aaPredicted RBP10.52□□□□□ -0.72
SRP54-208ENST00000555557 ZNF683Q8IZ20 524 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 CMTM8Q8IZV2 173 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 CFAP52Q8N1V2 620 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 NPWQ8N729 165 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 EFHBQ8N7U6 833 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 C12orf50Q8NA57 414 aaPredicted RBP10.52□□□□□ -0.72
SRP54-208ENST00000555557 CCDC114Q96M63 670 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 PRMT1Q99873 361 aaKnown RBP10.52□□□□□ -0.72
SRP54-208ENST00000555557 TMEM121Q9BTD3 319 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 TASP1Q9H6P5 420 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 ANKZF1Q9H8Y5 726 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 NDFIP2Q9NV92 336 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 DTLQ9NZJ0 730 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 STIM2Q9P246 746 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 MTCH2Q9Y6C9 303 aa10.52□□□□□ -0.72
SRP54-208ENST00000555557 A0A1W2PPC1 479 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 ZSCAN5CA6NGD5 496 aaPredicted RBP10.52□□□□□ -0.73
SRP54-208ENST00000555557 MFSD11O43934 449 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 FGF19O95750 216 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 TACR2P21452 398 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 TGM2P21980 687 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 AVPR1AP37288 418 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 PTGIRP43119 386 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 SLC11A2P49281 568 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 EIF3EP60228 445 aaKnown RBP10.52□□□□□ -0.73
SRP54-208ENST00000555557 DR1Q01658 176 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 ADAM15Q13444 863 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 NOMO1Q15155 1222 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 TRADDQ15628 312 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms