RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	RFFL	Q8WZ73	363 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	STAM	Q92783	540 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	ARRDC3	Q96B67	414 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	HERC2P3	Q9BVR0	1158 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	FSD1L	Q9BXM9	530 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	IRAK4	Q9NWZ3	460 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	PACSIN3	Q9UKS6	424 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	CCDC151	A5D8V7	595 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506		H0YIZ8	118 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	PRAMEF2	O60811	474 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	MBP	P02686	304 aa	Predicted RBP	4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	PEPD	P12955	493 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	NDUFB7	P17568	137 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	CYP3A7	P24462	503 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	DUSP1	P28562	367 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	GALNS	P34059	522 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	PSMC2	P35998	433 aa	Known RBP	4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	JAK3	P52333	1124 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	LMAN2	Q12907	356 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	NAA35	Q5VZE5	725 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	LRRC8D	Q7L1W4	858 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	C12orf76	Q8N812	135 aa	Predicted RBP	4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	CLEC4C	Q8WTT0	213 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	LINC00476	Q8WZB0	136 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	ZUFSP	Q96AP4	578 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	EDC3	Q96F86	508 aa	Known RBP	4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	PPP1R10	Q96QC0	940 aa	Known RBP	4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	SNX18	Q96RF0	628 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	NPAS1	Q99742	590 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	TMX4	Q9H1E5	349 aa	Predicted RBP	4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	TOR3A	Q9H497	397 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	ACAD9	Q9H845	621 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	USP29	Q9HBJ7	922 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	PDE11A	Q9HCR9	933 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	ALG13	Q9NP73	1137 aa	Known RBP	4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	HSF4	Q9ULV5	492 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	VPS4A	Q9UN37	437 aa		4.86	□□□□□ -1.63
KTN1-222	ENST00000555506	QSOX1	O00391	747 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	ANP32C	O43423	234 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	TTLL1	O95922	423 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	C1R	P00736	705 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	ALDOA	P04075	364 aa	Known RBP	4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	HKR1	P10072	659 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	ACP5	P13686	325 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	TNNT1	P13805	278 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	CXCR5	P32302	372 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	PGM1	P36871	562 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	GRIA3	P42263	894 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	CASP6	P55212	293 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	EEFSEC	P57772	596 aa	Known RBP	4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	TAP1	Q03518	808 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	FOXI1	Q12951	378 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	THOC5	Q13769	683 aa	Known RBP	4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	GPR68	Q15743	365 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	LIPM	Q5VYY2	423 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	MZT2B	Q6NZ67	158 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	DENND1B	Q6P3S1	775 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	KIRREL2	Q6UWL6	708 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	PEG10	Q86TG7	708 aa	Known RBP	4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	RNF125	Q96EQ8	232 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	COQ10A	Q96MF6	247 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	THAP7	Q9BT49	309 aa	Predicted RBP	4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	ELOVL1	Q9BW60	279 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	ABHD10	Q9NUJ1	306 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	FBXO2	Q9UK22	296 aa	Predicted RBP	4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	ADAMTS5	Q9UNA0	930 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	GDA	Q9Y2T3	454 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	COPG1	Q9Y678	874 aa	Known RBP	4.85	□□□□□ -1.63
KTN1-222	ENST00000555506	CYP46A1	Q9Y6A2	500 aa		4.85	□□□□□ -1.63
KTN1-222	ENST00000555506		F5H0A9	414 aa	Predicted RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	PEX12	O00623	359 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	GUCY1B2	O75343	617 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	DDX58	O95786	925 aa	Known RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	EBLN1	P0CF75	366 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	IGFBP2	P18065	325 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	FPR3	P25089	353 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	MRPS35	P82673	323 aa	Known RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	CFHR3	Q02985	330 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	GALNT2	Q10471	571 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	TBL3	Q12788	808 aa	Known RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	FOXD4	Q12950	439 aa	Predicted RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	MPP3	Q13368	585 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	BAK1	Q16611	211 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	RNASE12	Q5GAN4	147 aa	Known RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	ACAD10	Q6JQN1	1059 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	C4orf50	Q6ZRC1	276 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	NME8	Q8N427	588 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	LINC01465	Q8N7H1	131 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	ZBTB10	Q96DT7	871 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	C7orf26	Q96N11	449 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	RNF26	Q9BY78	433 aa	Predicted RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	CLPB	Q9H078	707 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	STN1	Q9H668	368 aa	Known RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	SYNPO2L	Q9H987	977 aa		4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	OLA1	Q9NTK5	396 aa	Known RBP	4.84	□□□□□ -1.63
KTN1-222	ENST00000555506	BLOC1S4	Q9NUP1	217 aa		4.84	□□□□□ -1.63

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