RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 DDI1Q8WTU0 396 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 MAIP1Q8WWC4 291 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 NT5C3BQ969T7 300 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 IL21Q9HBE4 155 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 NDFIP2Q9NV92 336 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 TLR6Q9Y2C9 796 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 UTP11Q9Y3A2 253 aaKnown RBP10.52□□□□□ -0.73
NEK9-205ENST00000555405 IRAK3Q9Y616 596 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 TRAV19A0A0A6YYK7 116 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 E9PAM4 449 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 C5orf67F2Z3F1 127 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 F5H5T6 163 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 MFSD11O43934 449 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 RBL1P28749 1068 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 GBP2P32456 591 aaPredicted RBP10.52□□□□□ -0.73
NEK9-205ENST00000555405 ETFBP38117 255 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 VSNL1P62760 191 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 ITKQ08881 620 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 FBXL22Q6P050 247 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 TMEM150AQ86TG1 271 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 UNC45BQ8IWX7 931 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 CARNMT1Q8N4J0 409 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 SHKBP1Q8TBC3 707 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 MYEOVQ96EZ4 313 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 ZSWIM3Q96MP5 696 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 NFU1Q9UMS0 254 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 TRANK1O15050 2925 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 GON4LQ3T8J9 2241 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 C3orf70A6NLC5 250 aaPredicted RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 CCDC188H7C350 402 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 STC2O76061 302 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 SEC31AO94979 1220 aaKnown RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 KLKB1P03952 638 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 SLC2A3P11169 496 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 CDC25CP30307 473 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 VIPR2P41587 438 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 SLC10A2Q12908 348 aaPredicted RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 DPYSL2Q16555 572 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 ALFQ53S48 1182 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 MS4A13Q5J8X5 152 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 ELMSAN1Q6PJG2 1045 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 JAMLQ86YT9 394 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 ARID3BQ8IVW6 561 aaPredicted RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 NAT16Q8N8M0 369 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 UHMK1Q8TAS1 419 aaKnown RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 SH3RF2Q8TEC5 729 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 IGSF8Q969P0 613 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 PABPC5Q96DU9 382 aaKnown RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 TTLL2Q9BWV7 592 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 PRKD2Q9BZL6 878 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 ASB3Q9Y575 518 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 SDK1Q7Z5N4 2213 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 GAS8O95995 478 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 KRT14P02533 472 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 CEBPBP17676 345 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 OR1E1P30953 314 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 CARSP49589 748 aaKnown RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 ARSEP51690 589 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 FAM193AP78312 1265 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 BASP1P80723 227 aaKnown RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 GPS1Q13098 491 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 ANO4Q32M45 955 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 BBS12Q6ZW61 710 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 TEKT4Q8WW24 435 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 ZFYVE19Q96K21 471 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 RPGRIP1Q96KN7 1286 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 AGAP3Q96P47 875 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 LSM7Q9UK45 103 aaKnown RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 LTBP2Q14767 1821 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 CHRNA3P32297 505 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 LMAN1P49257 510 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 MLLT6P55198 1093 aaPredicted RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 DLX2Q07687 328 aaPredicted RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 BRMS1LQ5PSV4 323 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 NUGGCQ68CJ6 796 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 CAPN12Q6ZSI9 719 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 ARCQ7LC44 396 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 VN1R2Q8NFZ6 395 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 ATL2Q8NHH9 583 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 CCDC110Q8TBZ0 833 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 TBC1D31Q96DN5 1066 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 MRPL38Q96DV4 380 aaKnown RBP10.51□□□□□ -0.73
NEK9-205ENST00000555405 BTN2A3PQ96KV6 586 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 IL37Q9NZH6 218 aa10.51□□□□□ -0.73
NEK9-205ENST00000555405 ACSL4O60488 711 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 TACR2P21452 398 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 GDF10P55107 478 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 COPS2P61201 443 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 ZXDBP98169 803 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 SMAD1Q15797 465 aaKnown RBP10.5□□□□□ -0.73
NEK9-205ENST00000555405 PWWP2AQ96N64 755 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 LINC00597Q9H2U6 94 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 ANKZF1Q9H8Y5 726 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 PIH1D1Q9NWS0 290 aaKnown RBP10.5□□□□□ -0.73
NEK9-205ENST00000555405 UBP1Q9NZI7 540 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 ZFP37Q9Y6Q3 630 aaPredicted RBP10.5□□□□□ -0.73
NEK9-205ENST00000555405 LIASO43766 372 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 HYAL1Q12794 435 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 DENND2CQ68D51 928 aa10.5□□□□□ -0.73
NEK9-205ENST00000555405 IL31Q6EBC2 164 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms