RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 WDCPQ9H6R7 721 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 ZDHHC4Q9NPG8 344 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 ABCB8Q9NUT2 735 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 AIPL1Q9NZN9 384 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 GGA2Q9UJY4 613 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 FBXO10Q9UK96 956 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 LUC7L2Q9Y383 392 aaKnown RBP12.53□□□□□ -0.4
SRP54-206ENST00000555317 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.53□□□□□ -0.49e-6■■■□□ 16.5
SRP54-206ENST00000555317 OTOGLQ3ZCN5 2332 aa12.53□□□□□ -0.4
SRP54-206ENST00000555317 TCRBV21S2A2A0A5A6 115 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 PRR23AA6NEV1 266 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 TMCO5BA8MYB1 307 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 PRRT4C9JH25 899 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 SGK1O00141 431 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 TIMM44O43615 452 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 RPP40O75818 363 aaKnown RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 MOCS3O95396 460 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 PABPC1P11940 636 aaKnown RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 PDGFRAP16234 1089 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 RDXP35241 583 aaKnown RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 FLT3P36888 993 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 WASP42768 502 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 SGSHP51688 502 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 RPS24P62847 133 aaKnown RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 ZBED6P86452 979 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 ATP11AP98196 1134 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 SIM2Q14190 667 aaPredicted RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 GEN1Q17RS7 908 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 ACBD5Q5T8D3 534 aaPredicted RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 CHST9Q7L1S5 443 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 CFAP52Q8N1V2 620 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 C3orf20Q8ND61 904 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 CPLX3Q8WVH0 158 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 HMGB4Q8WW32 186 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 CFAP57Q96MR6 1250 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 RPRD1AQ96P16 312 aaPredicted RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 TTYH3Q9C0H2 523 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 TKTL2Q9H0I9 626 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 SIK2Q9H0K1 926 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 EPC1Q9H2F5 836 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 HAUS4Q9H6D7 363 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 PIGVQ9NUD9 493 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 POLR3BQ9NW08 1133 aaPredicted RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 ELOVL2Q9NXB9 296 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 XPO7Q9UIA9 1087 aaKnown RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 PLA2G4CQ9UP65 541 aa12.52□□□□□ -0.41
SRP54-206ENST00000555317 SMG5Q9UPR3 1016 aaKnown RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 BZW2Q9Y6E2 419 aaKnown RBP12.52□□□□□ -0.41
SRP54-206ENST00000555317 GFRA2O00451 464 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 SYNCRIPO60506 623 aaKnown RBP12.51□□□□□ -0.41
SRP54-206ENST00000555317 LILRB5O75023 590 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 PAGE1O75459 146 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 LUC7L3O95232 432 aaKnown RBP12.51□□□□□ -0.41
SRP54-206ENST00000555317 ATP5BP06576 529 aaKnown RBP12.51□□□□□ -0.41
SRP54-206ENST00000555317 POLR2EP19388 210 aaKnown RBP12.51□□□□□ -0.41
SRP54-206ENST00000555317 HLA-FP30511 346 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 PRKCIP41743 596 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 CXCR3P49682 368 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 GSCP56915 257 aaPredicted RBP12.51□□□□□ -0.41
SRP54-206ENST00000555317 TRIM14Q14142 442 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 CDO1Q16878 200 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 ARL13BQ3SXY8 428 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 FNDC3BQ53EP0 1204 aaKnown RBP12.51□□□□□ -0.41
SRP54-206ENST00000555317 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
SRP54-206ENST00000555317 ACAD10Q6JQN1 1059 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 DCUN1D2Q6PH85 259 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 MON1BQ7L1V2 547 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.51□□□□□ -0.41
SRP54-206ENST00000555317 EMC1Q8N766 993 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 RXFP2Q8WXD0 754 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 PGAP3Q96FM1 320 aaPredicted RBP12.51□□□□□ -0.41
SRP54-206ENST00000555317 P2RY11Q96G91 374 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 SPACA7Q96KW9 195 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.51□□□□□ -0.41
SRP54-206ENST00000555317 CACNA2D2Q9NY47 1150 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 NCDNQ9UBB6 729 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 EBF1Q9UH73 591 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 TMEM59LQ9UK28 342 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 GMEB2Q9UKD1 530 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 CLEC4EQ9ULY5 219 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 ITIH6Q6UXX5 1313 aa12.51□□□□□ -0.41
SRP54-206ENST00000555317 A0A1B0GVM2 712 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 ANTXRLA6NF34 631 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 TCAF2A6NFQ2 919 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 ADAM23O75077 832 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 ADCY5O95622 1261 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 SKILP12757 684 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 HNRNPLP14866 589 aaKnown RBP eCLIP12.5□□□□□ -0.41
SRP54-206ENST00000555317 GPD1P21695 349 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 PBX1P40424 430 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 OXCT1P55809 520 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 EIF4EBP2Q13542 120 aaPredicted RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 AUHQ13825 339 aaKnown RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 BYSLQ13895 437 aaKnown RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 TSR1Q2NL82 804 aaKnown RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 OTUD1Q5VV17 481 aaPredicted RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 RNF219Q5W0B1 726 aaPredicted RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 SPECC1LQ69YQ0 1117 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms