RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 VNN1O95497 513 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 HLA-DRAP01903 254 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 NDST1P52848 882 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 RPS14P62263 151 aaKnown RBP13.83□□□□□ -0.2
TUBB3-207ENST00000554927 RACK1P63244 317 aaKnown RBP13.83□□□□□ -0.2
TUBB3-207ENST00000554927 ENPEPQ07075 957 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 KCNH2Q12809 1159 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 BROXQ5VW32 411 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 KIAA0895LQ68EN5 471 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 FBXL19Q6PCT2 694 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 CRYBG2Q8N1P7 616 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 CDK5RAP1Q96SZ6 601 aaKnown RBP13.83□□□□□ -0.2
TUBB3-207ENST00000554927 SLC2A11Q9BYW1 496 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 GTPBP4Q9BZE4 634 aaKnown RBP13.83□□□□□ -0.2
TUBB3-207ENST00000554927 CYP3A43Q9HB55 503 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 AASDHPPTQ9NRN7 309 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 HMGXB4Q9UGU5 601 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 NCKAP1Q9Y2A7 1128 aa13.83□□□□□ -0.2
TUBB3-207ENST00000554927 TMEM131Q92545 1883 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 CETN3O15182 167 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 SMC2O95347 1197 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 ASS1P00966 412 aaKnown RBP13.82□□□□□ -0.2
TUBB3-207ENST00000554927 GLDCP23378 1020 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 GTF2H1P32780 548 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 GCLMP48507 274 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 PSEN1P49768 467 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 KCNC4Q03721 635 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 ZBTB16Q05516 673 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 EDRF1Q3B7T1 1238 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 TBC1D25Q3MII6 688 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 CLEC20AQ6ZU45 233 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 RSRC2Q7L4I2 434 aaKnown RBP13.82□□□□□ -0.2
TUBB3-207ENST00000554927 SCD5Q86SK9 330 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 TTC39CQ8N584 583 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 FAM181AQ8N9Y4 354 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
TUBB3-207ENST00000554927 TSG101Q99816 390 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 NT5C1AQ9BXI3 368 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 MMRN2Q9H8L6 949 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 FBRSQ9HAH7 460 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 GDPD2Q9HCC8 539 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 GDF3Q9NR23 364 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 STRIP2Q9ULQ0 834 aa13.82□□□□□ -0.2
TUBB3-207ENST00000554927 SLC12A8A0AV02 714 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 HHLA1C9JL84 531 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 YKT6O15498 198 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 IGHV4-34P06331 123 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 EPB41P11171 864 aaKnown RBP13.81□□□□□ -0.2
TUBB3-207ENST00000554927 ARRB1P49407 418 aaPredicted RBP13.81□□□□□ -0.2
TUBB3-207ENST00000554927 TMPRSS3P57727 454 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 RHDQ02161 417 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 ARHGAP40Q5TG30 622 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 ZNF776Q68DI1 518 aaPredicted RBP13.81□□□□□ -0.2
TUBB3-207ENST00000554927 KRT39Q6A163 491 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 CHST9Q7L1S5 443 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 ERICH1Q86X53 443 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 SAP25Q8TEE9 199 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 GOLGA1Q92805 767 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 ORAI3Q9BRQ5 295 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 TMEM245Q9H330 911 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 GOLPH3LQ9H4A5 285 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 TMEM8AQ9HCN3 771 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 PRSS16Q9NQE7 514 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 CLCA2Q9UQC9 943 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 NUMA1Q14980 2115 aa13.81□□□□□ -0.2
TUBB3-207ENST00000554927 A0A1W2PPC4 97 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 TRIM49P0CI25 452 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 TRIM49CP0CI26 452 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 CD38P28907 300 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 ASPAP45381 313 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 SHBQ15464 509 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 MPPE1Q53F39 396 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 KDM7AQ6ZMT4 941 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 CPXM2Q8N436 756 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 ZNF248Q8NDW4 579 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 WFIKKN2Q8TEU8 576 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 TSC1Q92574 1164 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 CYFIP2Q96F07 1278 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 GSDMAQ96QA5 445 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 HNRNPABQ99729 332 aaKnown RBP13.8□□□□□ -0.2
TUBB3-207ENST00000554927 NIF3L1Q9GZT8 377 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 CPNE5Q9HCH3 593 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 ABCB8Q9NUT2 735 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 FBXL12Q9NXK8 326 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 CLIC5Q9NZA1 410 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 MARCH2Q9P0N8 246 aa13.8□□□□□ -0.2
TUBB3-207ENST00000554927 LRRC72A6NJI9 287 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 B8ZZF3 427 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 RNASEH1O60930 286 aaKnown RBP13.79□□□□□ -0.2
TUBB3-207ENST00000554927 WNT1P04628 370 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 ATP5BP06576 529 aaKnown RBP13.79□□□□□ -0.2
TUBB3-207ENST00000554927 CKMT2P17540 419 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 CD58P19256 250 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 EPHA8P29322 1005 aaPredicted RBP13.79□□□□□ -0.2
TUBB3-207ENST00000554927 HLA-FP30511 346 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 KIF11P52732 1056 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 UCNP55089 124 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms