RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 FAM124BQ9H5Z6 455 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-215ENST00000554656 METTL14Q9HCE5 456 aaKnown RBP11.03□□□□□ -0.64
SHMT2-215ENST00000554656 ITM2CQ9NQX7 267 aa11.03□□□□□ -0.64
SHMT2-215ENST00000554656 SFMBT1Q9UHJ3 866 aa11.03□□□□□ -0.64
SHMT2-215ENST00000554656 STRIP2Q9ULQ0 834 aa11.03□□□□□ -0.64
SHMT2-215ENST00000554656 SLCO1B1Q9Y6L6 691 aa11.03□□□□□ -0.64
SHMT2-215ENST00000554656 PLXNA2O75051 1894 aa11.03□□□□□ -0.64
SHMT2-215ENST00000554656 ANKRD11Q6UB99 2663 aaPredicted RBP11.02□□□□□ -0.64
SHMT2-215ENST00000554656 NPC1O15118 1278 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 ZBTB24O43167 697 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-215ENST00000554656 SH3BP5O60239 455 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 STX10O60499 249 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 HLA-FP30511 346 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 DAOAP59103 153 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 LRMPQ12912 555 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 EIF4HQ15056 248 aaKnown RBP11.02□□□□□ -0.65
SHMT2-215ENST00000554656 SGO2Q562F6 1265 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 HSP90AA4PQ58FG1 418 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 BSPRYQ5W0U4 402 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 MSANTD2Q6P1R3 559 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 TRIM59Q8IWR1 403 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 ZCCHC9Q8N567 271 aaKnown RBP11.02□□□□□ -0.65
SHMT2-215ENST00000554656 ZNF366Q8N895 744 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 CCDC112Q8NEF3 446 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 C1orf216Q8TAB5 229 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 DDI1Q8WTU0 396 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 CYB5D2Q8WUJ1 264 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 KAT5Q92993 513 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 SIPA1Q96FS4 1042 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 ERGIC2Q96RQ1 377 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 SLC2A11Q9BYW1 496 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 CIPCQ9C0C6 399 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 VPS16Q9H269 839 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 IL21RQ9HBE5 538 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 TAB2Q9NYJ8 693 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 STOML2Q9UJZ1 356 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 HBS1LQ9Y450 684 aaKnown RBP11.02□□□□□ -0.65
SHMT2-215ENST00000554656 NEUROG3Q9Y4Z2 214 aa11.02□□□□□ -0.65
SHMT2-215ENST00000554656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.02□□□□□ -0.65
SHMT2-215ENST00000554656 CACNA1GO43497 2377 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 MEI4A8MW99 385 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 ESPNB1AK53 854 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 RNF225M0QZC1 329 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-215ENST00000554656 PIK3R2O00459 728 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 TEX33O43247 280 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 IGLV3-27P01718 113 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 CYBBP04839 570 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 SYPP08247 313 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 TPM1P09493 284 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 C7P10643 843 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 CD19P15391 556 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 RGS7P49802 495 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 ZNF132P52740 706 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 CAMK2GQ13555 558 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-215ENST00000554656 PTPRNQ16849 979 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 CCDC40Q4G0X9 1142 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 FIGNQ5HY92 759 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 FKBP15Q5T1M5 1219 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 SYCP2LQ5T4T6 812 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 DCAF12L1Q5VU92 463 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 RAB44Q7Z6P3 723 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-215ENST00000554656 KIAA0907Q7Z7F0 614 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-215ENST00000554656 ADIPOR2Q86V24 386 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 SCML4Q8N228 414 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 CHCHD4Q8N4Q1 142 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.01□□□□□ -0.65
SHMT2-215ENST00000554656 CLEC4CQ8WTT0 213 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 UCMAQ8WVF2 138 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 ZCCHC14Q8WYQ9 949 aaKnown RBP11.01□□□□□ -0.65
SHMT2-215ENST00000554656 KCTD13Q8WZ19 329 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 FOXJ1Q92949 421 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 MYEOVQ96EZ4 313 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 NUP58Q9BVL2 599 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 DNAI2Q9GZS0 605 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 TMEM245Q9H330 911 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 LRRC4Q9HBW1 653 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 OLA1Q9NTK5 396 aaKnown RBP11.01□□□□□ -0.65
SHMT2-215ENST00000554656 ABCB8Q9NUT2 735 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 SUSD2Q9UGT4 822 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 MSRB2Q9Y3D2 182 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.01□□□□□ -0.655e-7■■□□□ 13.5
SHMT2-215ENST00000554656 ITPR1Q14643 2758 aa11.01□□□□□ -0.65
SHMT2-215ENST00000554656 NBEAQ8NFP9 2946 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 A0A1B0GTW7 788 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 TMEM8BA6NDV4 472 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 SRRM3A6NNA2 597 aaPredicted RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 METTL12A8MUP2 240 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 SYNCRIPO60506 623 aaKnown RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 CBFA2T3O75081 653 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 CAPNS1P04632 268 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 EPHX1P07099 455 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 SETSIPP0DME0 302 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 VDRP11473 427 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 LCP1P13796 627 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 BRD2P25440 801 aaKnown RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 MSNP26038 577 aaKnown RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 SLC6A4P31645 630 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 FMO5P49326 533 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 SLC8A3P57103 927 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 UBXN1Q04323 297 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms