RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RGS19P49795 217 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 MXI1P50539 228 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 SCNN1GP51170 649 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 ZNF75DP51815 510 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 EPHB3P54753 998 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 MYL7Q01449 175 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 NAB2Q15742 525 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 PTPN21Q16825 1174 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 CR1LQ2VPA4 569 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 EPC2Q52LR7 807 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 NOMO2Q5JPE7 1267 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 CPZQ66K79 652 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 DPY19L2P1Q6NXN4 242 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 PSRC1Q6PGN9 363 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-212ENST00000554486 GLB1LQ6UWU2 654 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 TRAPPC11Q7Z392 1133 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 TMCO2Q7Z6W1 182 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-212ENST00000554486 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-212ENST00000554486 KIF18BQ86Y91 864 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 IGDCC3Q8IVU1 814 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 FAM26EQ8N5C1 309 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 LMO3Q8TAP4 145 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 MZB1Q8WU39 189 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 DLG3Q92796 817 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 SEMA4DQ92854 862 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 TOP1MTQ969P6 601 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 CASD1Q96PB1 797 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 TSPAN18Q96SJ8 248 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 CRACR2AQ9BSW2 395 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 UBN1Q9NPG3 1134 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 CACNG4Q9UBN1 327 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 TUBGCP4Q9UGJ1 667 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 SIK3Q9Y2K2 1263 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 COQ4Q9Y3A0 265 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 C2CD2Q9Y426 696 aa6.74□□□□□ -1.33
SCFD1-212ENST00000554486 CHD9Q3L8U1 2897 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 ANO9A1A5B4 782 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 PES1O00541 588 aaKnown RBP6.73□□□□□ -1.33
SCFD1-212ENST00000554486 PPEF2O14830 753 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 P4HA2O15460 535 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 B4GALT3O60512 393 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 N4BP1O75113 896 aaKnown RBP6.73□□□□□ -1.33
SCFD1-212ENST00000554486 DDHD2O94830 711 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 ADCY5O95622 1261 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 POMCP01189 267 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 HLA-DRAP01903 254 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 TNNC2P02585 160 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 AMHP03971 560 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 THP07101 528 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 TPM2P07951 284 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 TMEM191BP0C7N4 346 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 ATP2A2P16615 1042 aaKnown RBP6.73□□□□□ -1.33
SCFD1-212ENST00000554486 SLC9A1P19634 815 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 PON1P27169 355 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 KLK7P49862 253 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 MRE11P49959 708 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 AP3M2P53677 418 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 APBA1Q02410 837 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 UBXN1Q04323 297 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 GRIK3Q13003 919 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 SYCP1Q15431 976 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 FILIP1LQ4L180 1135 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 FIGNQ5HY92 759 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 C9orf50Q5SZB4 431 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 FKBP15Q5T1M5 1219 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 KRT39Q6A163 491 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 GBP6Q6ZN66 633 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 LCNL1Q6ZST4 164 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 USP37Q86T82 979 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 PROSER1Q86XN7 944 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 ZNF280BQ86YH2 543 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 AHI1Q8N157 1196 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 BEST2Q8NFU1 509 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 URGCPQ8TCY9 931 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 TAS1R2Q8TE23 839 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 CACTINQ8WUQ7 758 aaKnown RBP6.73□□□□□ -1.33
SCFD1-212ENST00000554486 CHAC2Q8WUX2 184 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 ALG3Q92685 438 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 ZNF689Q96CS4 500 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-212ENST00000554486 ANKRD36BP1Q96IX9 119 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 ERGIC2Q96RQ1 377 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 RPS6KC1Q96S38 1066 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 PI4K2AQ9BTU6 479 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 TRIM5Q9C035 493 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 INTS2Q9H0H0 1204 aaKnown RBP6.73□□□□□ -1.33
SCFD1-212ENST00000554486 XYLT2Q9H1B5 865 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 SIX2Q9NPC8 291 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 TBC1D13Q9NVG8 400 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 DPP3Q9NY33 737 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 H2AFY2Q9P0M6 372 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-212ENST00000554486 GCNT4Q9P109 453 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 UBQLN1Q9UMX0 589 aaKnown RBP6.73□□□□□ -1.33
SCFD1-212ENST00000554486 B3GALT1Q9Y5Z6 326 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 KIAA1671Q9BY89 1806 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 GBF1Q92538 1859 aa6.73□□□□□ -1.33
SCFD1-212ENST00000554486 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-212ENST00000554486 SLC12A8A0AV02 714 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 TBKBP1A7MCY6 615 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 H0YGN5 161 aa6.72□□□□□ -1.33
SCFD1-212ENST00000554486 PIRO00625 290 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms